Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4553 |
Symbol | |
ID | 4583292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 35633 |
End bp | 37444 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639771859 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_918312 |
Protein GI | 119387278 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.984926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA TCGCCGCATT CATCGCCTCG GTTCATCCCT ATGACAGCCT GCCGCAGGAC GAGCTGGCGC GGGCCGCGGC GTCGTTCAAG CGCAGGACCT ATCCGGCCGG CAGCGTGATC TATCGCCATG GCGACCGGCT GGCGGGGCTT TACCTGATCG AAAGCGGTCT GGTCCGGGTC TCGGATGCTG CCGGGGATTC CGTTTCGGAA CTGGTGGCGC GCAATTCATT CGGCGAAAGG GGGCTGCTGC GCGACGGGGT GGCGGTGACC ACGGCGACCG CCGTCGAGGA TACGACCGTG CTGATGCTGC CGCGCGCCGA ACTGATGCGG TTGATCGGCA GCCATCGCGC GGTGGCGCGT TTCTTCGACC GCAGCGGCCT GCCCGGCGAC CGCGAGAGCG CTCTGGCGCT GCTGAAGGTC GGGGATTTGA TCGGCGGGCA GGTGCCGCTG AGCTGCACCC CCCAGACCCC CGCCATCGAG GCCGCCCGCG CCATGCGCGA CGCCCGCGTC AGCAGCATCG GCGTGCTGGA CGGGGACCGG CTGGTCGGGC TGGTCACCAT CCGCGACATC TCGAACCGCA TCGTTGCCGA GGGGCGCGAC GCGAATGTGC CGGTTGCGCA GGTGATGACG CCCGACCCGA TCACGCTGTC GCCCTTGGAG CTGGGCTATG ACGTGCTCAA CATCATGCTC GAGCGCCGCA TCGGCCATCT GCCGGTGGTC GAGAAGGGCC GCTTCGTCGG CATGGTCAGC CAGACCGACC TGACGCGGGT GCAGGCGATC TCGGCCTCGG CGCTGATCCG CGACATCGCG CAATCCGAGG ATGTCGGCGA CATGGCGGCG GCGACCGCAC GCATTCCCGA ACTGCTGCTG CAACTGGTCA ACGGCCATCA CCGGCACGAA ACCATCACCC GCATGATCAC CGACATTGCC GATGCGGTGA CCCGGCGCCT ACTGGTCATG GCCGAGGTGC GCCTGGGTCC GCCGCCCGGC CCGTGGCTGT GGGCGGCCTG CGGCAGCCAG GGGCGGCAGG AACAGACCGG CGTGTCGGAT CAGGACAATT GCCTGATTCT CGGCGACGAT TGCGACCCGG ACGATCCCTG GTTCGCCGAG CTTGCGCGCT TTGTCTGCGA CGGGTTGAAC GCATGCGGCT ATGTCTATTG CCCGGGCGAG ATGATGGCCA TCACGCCGCG CTGGCGCCAG CCGCGCCGCG TCTGGCGCGG TTATTTCCAC GACTGGATCA CCCATCCCAG CCCCGAGGCG CAGATGCTGG CCTCGGTCAT GTTCGACCTG CGCGCCATCG GCGGCGATGC CGCGCTGCTG GACGGGCTGC AGGCCGAGAC GCTGCGGATG GCGGCGAAGA ACTCGATCTT CGTGGCGCAT ATGATCTCGA ACGCGCTGAA GCACCGCCCG CCCCTGGGGC TGATCGGCGG CTTTGCGACC GTGCGCACCG GCGAGCATCG CAACCAGATC GACATGAAGC TAAGCGGCGT CGTGCCGGTG TCCGACCTGG CGCGGATCTA TGCGTTGCAG GGGCAGCTGA CCCCGGTCAA TACCCGCGCC CGGCTGGTCG AGGCGCAGGG GGCGGGCATC ATCTCGGGCA GCGGCGCGCG CGACCTGATC GCGGCCTACG ACCTGATCCA GACCACGCGG CTGGAGAACC AGGCCGCGCA GATCCGCGCC GGCGAACGGC CGGGGAACCA CCTGTCCCCC GCCGCGCTGC CCGATTTCCA GCGCAGCCAC CTGCGCGACG CCTTCGTGGT GGTGCGGGGG ATGCAATCGG CGCTGGGCCA TGGCAAGGGA ATGTTGGGAT GA
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Protein sequence | MTDIAAFIAS VHPYDSLPQD ELARAAASFK RRTYPAGSVI YRHGDRLAGL YLIESGLVRV SDAAGDSVSE LVARNSFGER GLLRDGVAVT TATAVEDTTV LMLPRAELMR LIGSHRAVAR FFDRSGLPGD RESALALLKV GDLIGGQVPL SCTPQTPAIE AARAMRDARV SSIGVLDGDR LVGLVTIRDI SNRIVAEGRD ANVPVAQVMT PDPITLSPLE LGYDVLNIML ERRIGHLPVV EKGRFVGMVS QTDLTRVQAI SASALIRDIA QSEDVGDMAA ATARIPELLL QLVNGHHRHE TITRMITDIA DAVTRRLLVM AEVRLGPPPG PWLWAACGSQ GRQEQTGVSD QDNCLILGDD CDPDDPWFAE LARFVCDGLN ACGYVYCPGE MMAITPRWRQ PRRVWRGYFH DWITHPSPEA QMLASVMFDL RAIGGDAALL DGLQAETLRM AAKNSIFVAH MISNALKHRP PLGLIGGFAT VRTGEHRNQI DMKLSGVVPV SDLARIYALQ GQLTPVNTRA RLVEAQGAGI ISGSGARDLI AAYDLIQTTR LENQAAQIRA GERPGNHLSP AALPDFQRSH LRDAFVVVRG MQSALGHGKG MLG
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