Gene Pden_4547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4547 
Symbol 
ID4583286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp27051 
End bp28412 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content63% 
IMG OID639771853 
Productglutamate--ammonia ligase 
Protein accessionYP_918306 
Protein GI119387272 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.294027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCA ACCTTTCCTT GAATAACCTG AAGCAGGCGG TCCAAGCCGG CGAAATCGAC 
ACCGTGATCG TCGCGTTGGT CGATATGCAG GGCCGTTTGA TGGGCAAACG CTTCCACGCG
GCCCATTTTC TCGAGAACCA CGACGAGACG CATTGCTGCA ACTACCTGCT GGCGACCGAT
CTGGAGATGA ACACGGTGCC GGGCTATGCC TCGGCAAGTT GGGCGGCGGG TTACGGCGAC
TATGTGATGA AGCCGGACCT TTCGACCCTG CGCCGCCTGC CGTGGGCGGC GGGAACCGCG
CTGTGCATGT GCGATCTCTA CGACCACAAG ACCCACGAAC TGGTCCCCCA CGCCCCGCGC
AGCGTGTTGC GCCGGCAGGT CGAACGCGCA GCCGCGCTGG GTTTCCAGCC GATGATGGCG
ACCGAGCTTG AATTCTACCT GTTCGAGCAA TCCTTCAAGC ATCACTTCGA CAGCGGCTAT
CGCTGCCTTG TCCCGACCGC GCGCCACAAT GTCGACTATG CCCTCGGCGG CACCTTCGCA
GAGGAACCCG TGATGCGGGA TCTGCGCAAC GGTCTTTACG GCGCCGGCAT CCCGGTCGAG
AACTCGAAGG GTGAAGCCAA CGCCGGCCAG CACGAGATCA ATGTCAGATA TTCGGATGCG
CTGGATACCT CGGACATGCA TGTCGTGGTC AAGGCTGCGA CCAAGGAGAT CGCGAGCAAG
CACGGCCTCT CGGCCACCTT CCTTGCGAAA GTCGCGCATG GACAGGCGGG CTCGTCCAGC
CATGTGCACC AATCCCTGTT CAGGGACGGC GAGAACGCCT TTTTCGACGA GAATGCCGAA
CATGGCATGT CCGACCTGAT GCGGCACTAC ATGGCGGGCC AGTTGGAACA TGCGCGCGAA
CTGACCTTTT TTCTTGCCCC CTATGTCAAC AGCTACAAGC GTTTCGTGAC CGGCCTTTTC
GCGCCGACGA ACGCGATCTG GTCGGTGGAC AACCGCACGG CCGGCTTCCG CGTTTGCGGC
GACAACACCA AGGGCGTGCG CATCGAATGC CGGATCGGCG GATCGGACCT GAACCCCTAT
CTGGCCTGCG CCGCGCTGCT CGCCGCCGGG CTGGAGGGGA TCGAGCGGAA ACTGGCGCTG
GAGCCGGAAT TCACCGGTGA CGCCTATGCG GCCCAGGATG CCCGGCAGGT GCCCAAGACC
CTGCATGAGG CCGCCGATGC CCTGGAGGGC TCGGCCATGT TGCGCGCGGC GATGGGTGAT
GGGGTCATCG ATCACTATGT CCACGCCGCC CGCTGGGAAG TCGAGGAATT CAACCGCGCC
GTCACCGACT GGGAACTGGC CCGCGGGTTC GAGCGCGCCT GA
 
Protein sequence
MPANLSLNNL KQAVQAGEID TVIVALVDMQ GRLMGKRFHA AHFLENHDET HCCNYLLATD 
LEMNTVPGYA SASWAAGYGD YVMKPDLSTL RRLPWAAGTA LCMCDLYDHK THELVPHAPR
SVLRRQVERA AALGFQPMMA TELEFYLFEQ SFKHHFDSGY RCLVPTARHN VDYALGGTFA
EEPVMRDLRN GLYGAGIPVE NSKGEANAGQ HEINVRYSDA LDTSDMHVVV KAATKEIASK
HGLSATFLAK VAHGQAGSSS HVHQSLFRDG ENAFFDENAE HGMSDLMRHY MAGQLEHARE
LTFFLAPYVN SYKRFVTGLF APTNAIWSVD NRTAGFRVCG DNTKGVRIEC RIGGSDLNPY
LACAALLAAG LEGIERKLAL EPEFTGDAYA AQDARQVPKT LHEAADALEG SAMLRAAMGD
GVIDHYVHAA RWEVEEFNRA VTDWELARGF ERA