| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4545 |
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| Symbol | |
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| ID | 4583284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 24608 |
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| End bp | 25933 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639771851 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_918304 |
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| Protein GI | 119387270 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATG AATGGATCGC CATCCTGATG TTCTCGACGA TGCTCCTGAT GATGATCACG
GGGCAGCGGG TCTTCGGGGC CATCGGCTTC ATCGCCGTGG TGGCGGCGTT GCTCCTGTGG
GGGCCGGGCG GCACCGACAT GGGCTTTTCG GCGGTGATGA AGGTGATGCG GTGGAACGCG
TTGCTGACGC TGCCGATGTT CGTCTTCATG GGCTATGTGA TGTCGGAATC GCGGCTGGCC
GACGACCTTT ATCGGATGTT TCACGTCTGG TTCGGGCCGC TGCCGGGCGG GCTTGCCATC
GGCACGGTGC TGTTGATGGT GATGATCTCG GCCATGAACG GGCTGTCGGT CGCCGGCATG
GCCATCGGCG CCACCATCGC CCTGCCCGAA CTGGTCAAGC ACCGCTATGA CAAGCCGATG
ATCTCGGGCG TCATTCAGGC GGGGTCCAGC CTTGGCATCC TGATCCCGCC TTCGGTCGTT
CTGGTGCTGT ATTCGCTGAT CGCGCGCCAG CCGGTCAGCC AGCTGTGGCT GGCGGGGATC
GGGCCGGGGT TGCTGATGGC CGCACTGTTC ATCGCCTATA TCCTGATCCG CACCTGGCTG
AATCCGGCGC TGGCCCCCCC GATGCCGGCC GAGGAACGCG CGGCGATCAC CTGGCCGCAA
CGGTTTCGGC TGCTGCGCGC CGGCATCCTG CCGATCATCA TCTTCGCCGC AATGATGATC
CCCTTCGTCA AGGGCTGGAC CTCGCTGACC GAAAGCAGCG TCATCGGCGC CGTGTCGTCG
GTGGTCGCCG CCGTCCTCAA GGGCCGCTTC ACCCGGCATG TGTTCGAGAT CGCGACCCGC
CAGACGCTGG CGATCACCTG CATGTTCATG CTGATCATCA TGGCCGCGCT CAGCTTCGGG
GCGGTCTTCG ACGGGCTGGG GGCCGGCCGC GCCATCGGGC GGCTGTTTCT GGGCGAGATG
CACCTGACGC CCTTGCAGGT GCTGCTGATC ATGCAGGCAT CCTTCCTGAT CCTGGGGATG
TTCCTGGACG ACACCGCGAT GCTGGTGATC GTCGCGCCGA TCTATGTCAC CATGGCGCGC
AGCCTCGGCT TCGATCTGGT GTGGTATGGC ATCCTTTACA CCATCACCTG CCAGATCGCC
TACCTGACGC CCCCGTTCGG CTACAACCTG TTCCTGATGC GTGCGCTCGC GCCTCGGGAT
TTCACGCTTG GGGTGATCTA TCGCTCGGTA TTGCCCTTCG TGATGATCAT GCTGCTGACG
CTTGGGCTGG TCATTGCGTT CCCCGGCATC GCCATGTGGC TGCCCCAGTC GATCTATGGA
CAATGA
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| Protein sequence | MSHEWIAILM FSTMLLMMIT GQRVFGAIGF IAVVAALLLW GPGGTDMGFS AVMKVMRWNA
LLTLPMFVFM GYVMSESRLA DDLYRMFHVW FGPLPGGLAI GTVLLMVMIS AMNGLSVAGM
AIGATIALPE LVKHRYDKPM ISGVIQAGSS LGILIPPSVV LVLYSLIARQ PVSQLWLAGI
GPGLLMAALF IAYILIRTWL NPALAPPMPA EERAAITWPQ RFRLLRAGIL PIIIFAAMMI
PFVKGWTSLT ESSVIGAVSS VVAAVLKGRF TRHVFEIATR QTLAITCMFM LIIMAALSFG
AVFDGLGAGR AIGRLFLGEM HLTPLQVLLI MQASFLILGM FLDDTAMLVI VAPIYVTMAR
SLGFDLVWYG ILYTITCQIA YLTPPFGYNL FLMRALAPRD FTLGVIYRSV LPFVMIMLLT
LGLVIAFPGI AMWLPQSIYG Q
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