Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4544 |
Symbol | |
ID | 4583283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 24075 |
End bp | 24611 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639771850 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_918303 |
Protein GI | 119387269 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAACT GGGCGATCTG CTATGTCAGG CGCATCGAGG CGCTGAACTA CCGCCTTGGC CGCATCGTCA TGTATCTGCT GTTCGTGATC ATGGGCGTCC TGCTGTGGTC CTCGCTCACC AAGGTGATCA GGATGCCGTC GCTGTGGACG CTGGAAGTGG CGCAATTCAC GCTGGTCGCC TATTACCTGC TGGGCGCGCC CTATTCGATG CAACTGGGCG CGAATGTGCG GATGGACCTG CTCTATGCCC GGATGCCGGT GAAGCGGCAG GCGATCTGGG ACATCTTCAC CATCTTCTGC CTGTTGTTCT ATCTGGGCGT GATGCTGTGG GGGGCGGTGG ACAGCACCGC CTACAGCTTT CGGATAGGCG AGCGCGCGCC AAGCGCGTGG CGGCCTCCGC TATGGCCGAT CAAGGTCGTC ATCACGATCA GCTTCGCGCT CATGATCCTG CAAGCCATCG CCCATCTGAT CCGCGACATT GCCATTCTGC GCAACGTCGA CATTCCCCGC CCCTTTGTCG GCGAGGTCAA CAGATGA
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Protein sequence | MPNWAICYVR RIEALNYRLG RIVMYLLFVI MGVLLWSSLT KVIRMPSLWT LEVAQFTLVA YYLLGAPYSM QLGANVRMDL LYARMPVKRQ AIWDIFTIFC LLFYLGVMLW GAVDSTAYSF RIGERAPSAW RPPLWPIKVV ITISFALMIL QAIAHLIRDI AILRNVDIPR PFVGEVNR
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