| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4539 |
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| Symbol | |
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| ID | 4583096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 19602 |
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| End bp | 20843 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639771845 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_918298 |
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| Protein GI | 119387264 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.605782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.634482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGG CAAAGCCGTT TACGATTGAG AAGAGAGAGG TCTGGGAGGC GTTCCGGCAT
GTGGACGCCA ATCAGGGTGC AGCTGGTGTA GACGGGCAGA CGCTCGAAAG CTTCGGGGAA
CGGCTTGGTC CGAACCTTTA CAAGCTTTGG AACCGGATGT CCTCTGGCAG CTACATGCCA
TCGTCGGTAC GCCGGGTGAT GATCCCCAAG GCAGATGGGG GCCAACGGCC GTTGGGTATT
CCGACGGTCA CGGACCGCAT CGCGCAGGAG GTCGTCCGGC TTTATCTGGA ACCGCTCGTG
GAACCAGTAT TCCACAGGGA TTCCTATGGG TATCGGCCTG AACGCTCTGC CATCGACGCC
ATCCGGAAGG CGCGCCAGCG ATGCTGGCGC TACGACTGGG TGTTGGACAT GGACATCAAA
GGTTTCTTCG ATACCATCGA TCATGAGCTC CTGCTCAAGG CAGTCCGCCA TCATACGGAC
TGTCGATGGG TGCTGCTTTA TATCGAACGG TGGCTGAAGG CACCTGTGAG GATGGAAGAT
GGCAGTCTTG TCCCGCAGGA ACGCGGAACG CCGCAGGGTG GGGTGATCTC GCCGCTGCTG
GCCAACCTGT TCCTGCACTA CGCTTTCGAC AGATGGCTGG ATCGAGAGAA CCCGCAAGTG
CCGTTCGAGC GCTATGCGGA TGACATCATT TGTCATTGTC GGACGGAAGA TGAAGCTCGC
AGGCTGTGGC AGCAGGTCGA AAACCGGCTC GCCGGATGCG GTCTGACACT TCATCCGCAG
AAGACAAAGA TCGTCTACTG CAAGGACACG AACCGAAAGG GTTCCTTCCC GACGGTTGCT
TTCGACTTTC TCGGCTACAG GTTCCAGCCC CGGCTGGCGA TCTGGCGCGG AGGTTTGTTT
GGCGTATCCT ATCTTCCGGC GGCCAGCCCC AAAGCCCTGA AGTCGTTCCG ACGCCGGGTG
CGCAACTGGG GATTGCAGCG GCGCAGCGAC AAGGGGCTGA TCGATCTGGC CCGCATGTTC
AATCGACAGA TTGAGGGGTG GATCGGCTAC TTCAGATGCT TCTACAAATC GGCGCTCTAT
TCGACACTAC GTCTGATCGA CGCTCATTTG GTCCGTTGGG TGATGCGGAA GTATAAACGC
TTCAAGCAAC GACCCCGGCA AGCGCGGCTC TGGCTCGCCA GAATTGCGAA ATCTACGCCG
GGATTGTTCA CCCACTGGTC TCTTCTTTAC GCAAATGGCT GA
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| Protein sequence | MTEAKPFTIE KREVWEAFRH VDANQGAAGV DGQTLESFGE RLGPNLYKLW NRMSSGSYMP
SSVRRVMIPK ADGGQRPLGI PTVTDRIAQE VVRLYLEPLV EPVFHRDSYG YRPERSAIDA
IRKARQRCWR YDWVLDMDIK GFFDTIDHEL LLKAVRHHTD CRWVLLYIER WLKAPVRMED
GSLVPQERGT PQGGVISPLL ANLFLHYAFD RWLDRENPQV PFERYADDII CHCRTEDEAR
RLWQQVENRL AGCGLTLHPQ KTKIVYCKDT NRKGSFPTVA FDFLGYRFQP RLAIWRGGLF
GVSYLPAASP KALKSFRRRV RNWGLQRRSD KGLIDLARMF NRQIEGWIGY FRCFYKSALY
STLRLIDAHL VRWVMRKYKR FKQRPRQARL WLARIAKSTP GLFTHWSLLY ANG
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