Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4529 |
Symbol | |
ID | 4583087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 10534 |
End bp | 12111 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639771836 |
Product | Na+/solute symporter |
Protein accession | YP_918289 |
Protein GI | 119387255 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCT CTTATTTCGT CGTTTTCGGC GGCTATCTGG CCTTTCTGAC CTGGACCTGC CTCAAGAGCA TGAAAGAGGT CGAGTCCCTG TCCGACTTCA CCACCGGCGG CCACCGCATG GGGCTGCTGC TGGGCATCGG CACCTCGGTC GCGACCTGGG TCAGCGTGGC CTCGGTGATG GGCGTGCCGG GCCAGCTTTA TCGCACCGGC GTCGCCGCGA TCATCGGTTG GGTCGCGGGC TGGTTCCTGG CCACGGCGGT CATGCCGATC CTAGCCTACA AGGTGCGCCG GCCCGAATTG CCGGCCCGGA CCTTTCCCGA ATTCATCCGC ATGCGCTTCG AGCCGTTCGA GCGCATCAGC GGGTTGCAGC TGATCGTCGC GGCGCTGATG CTGGTGGGCT ATTTCATCTT CTGCCATCTG CAGGTCGTCG GTTTCGGCAT CGTCTTCAAC ACGATCACCG GCATCCAGTA TGAATATGCC ATCTTCGCCT TCCTGGTCCT GCTGGCATTG ACCTCGCTTG GCGGTTTCTG GTCGGTGGCG GCCACGGATA CGCTGAACGC GGTGCTGATC CTGATCGGCC TTGCCTTCGG GACGGGCGCG ATCCTTTACG CCTCCGGCGG GCTTGGCCCG ATCCTCGATG CCGTGGCGAC GACCACCGCG CCGACCAATG TCGGCGGCGA GCCGCTGGAG CCGGGCATCC TGCTGTCGCC CGCGGGCACA TTCGGCTGGT CGGTGCTGAT GGGGATCTTC ATGTCGAACG CCCTGGGCGC CTCGGTCGCG CCGCACTGGA TCAACCGCTT CATGGCACCC CGGAACAGCA AGGCCGCCGT GCTGCAGATG ATGTGGACCG TGATCGCCCT GATCCCGATC TTCCTGTGCC TGATCGTGAT CGGCCTTGGC GCCAAGGCGC TTTTGCCCAG CCTGCCCGCC GACAAGACCA CCGATTACAT CATGCCGCTG ATCGTGCAGA ACTACGCTCC GCCCTTCGTC GGCGCCCTGA CGCTGATCGC GTTGCTGGCG GCGGCGGTCT CGACGGCGAA CTCGATGCTG CTGAACTGCG GCACGTCGCT ATACTACGAC CTCTACCGCT CGCTCTATCC CGACCGCCAG TTCGACGACG AGCGTGCCAC GCGCCATCTG CGCTACTCCG TTCTGGTTCT CGGCCTGCTC TCGGTGATCA GCGCGATCAA GCCGCCGGTG CTGCTGGCGA TGGGGTTCAC CTATGTCTAT GGCGCGTTTG GCGCGGCCTT CATGTGGCCG GTCTGGTTCG GGCTGTTCTG GAAGCGGATG AACCGTGCGG GCGCCTATGC GGGCATCATC GTGGGTGTGG CGGCCTTCAT CGCCGCCAAG GCGATGGGTG CGGACAATCC TTTCGTGGTC GGTGCCGGCC TGTCGCTGCT TGCCACGCTG GCCGGTGTCT TTCTCAGCCC GGCGCCTCCG AGGGAAGCCT ACGAGGCCTA TTTCGACGCC GAGGTCAGCC CCTCGACCCG CGCCGTCGCG CTGCGCATCC GCCGCGAAAG CGACCATGCG CATGAAACCC ACGGCGCTGC ACCGCTTGCG GGAGAGGCCA AGGCATGA
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Protein sequence | MSISYFVVFG GYLAFLTWTC LKSMKEVESL SDFTTGGHRM GLLLGIGTSV ATWVSVASVM GVPGQLYRTG VAAIIGWVAG WFLATAVMPI LAYKVRRPEL PARTFPEFIR MRFEPFERIS GLQLIVAALM LVGYFIFCHL QVVGFGIVFN TITGIQYEYA IFAFLVLLAL TSLGGFWSVA ATDTLNAVLI LIGLAFGTGA ILYASGGLGP ILDAVATTTA PTNVGGEPLE PGILLSPAGT FGWSVLMGIF MSNALGASVA PHWINRFMAP RNSKAAVLQM MWTVIALIPI FLCLIVIGLG AKALLPSLPA DKTTDYIMPL IVQNYAPPFV GALTLIALLA AAVSTANSML LNCGTSLYYD LYRSLYPDRQ FDDERATRHL RYSVLVLGLL SVISAIKPPV LLAMGFTYVY GAFGAAFMWP VWFGLFWKRM NRAGAYAGII VGVAAFIAAK AMGADNPFVV GAGLSLLATL AGVFLSPAPP REAYEAYFDA EVSPSTRAVA LRIRRESDHA HETHGAAPLA GEAKA
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