| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4486 |
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| Symbol | lpxC |
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| ID | 4583036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1700528 |
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| End bp | 1701466 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639771793 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_918246 |
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| Protein GI | 119387191 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0424585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCA CCATCGCTCA GAAAGCCCAG TTCCGCGGCG TCGGGCTGCA TTCGGGTGCG
GCCGTCCGGC TGACGATCCT GCCGGCTCCG GCGGATCACG GCATCGTCTT CGTGCGCACC
GATCTGGACC GCGCCCGCAT TCCGGCGAAC TGGGACCACG TCACCCCCTC GCAGCTTTGC
ACCTTGTTGG ACAACGGCCG GGGCGCCACC GTCTCGACGG TCGAGCATGT GATGGCGGCG
CTGTCGGGAA CCGGCATCAA CAATGCCGTG GTCGAGGTGA ACGGGCCGGA AGTCCCGATT
CTCGACGGTT CCTCGGCGCC CTTCGTGCAG GGCATTCTGG AGGCCGGCCT GCGCCAGCAG
CACGCCCCCC TGCGCGCGAT CCGCGTCCTG CGCGAGGTCG AGGTGCAGCA GGGCGAGGCC
TTTGCCCGCC TGTCGCCCGC CGATCACCTG GAGATCCATT TCGACATCGA CTTCGTGGAT
GCGGCGATCG GCCACCAGGA AAAGCGCCTC GACATGGCGA ATGGCAGCTT CGTGCATGAG
CTGATGGACA GCCGCACCTT CTGCCGCCAG GCCGACGTGG TGCAGATGCA GCGCAACGGG
CTGGCGCTTG GCGGCACCTA CCTGAACGCC GTGGTGGTCG ATGGCGACAA GGTGCTGTCG
CCGGGCGGCC TGCGCCACCG CGACGAGGCC GTGCGCCACA AGATGCTGGA TGCGGTGGGC
GACCTCGCGC TGGCCGGGGC GCCGCTTCTG GCGCGCTATA CCGGCCATCG CGCCGGGCAC
GCCATGACCA ACAAGCTGCT GCGCGCGCTT TTCGCCCAGC CGGATGCCTG GGAATGGGTC
ACGCTGACCC CGGCGATGGA AAGCCGCCAG CCCGGCGCCG GGGTCATCGC CTCGGCCGCG
CGGCTTGCGC CCCGCGCCCG CCAGCTGGCC GTCGCCTGA
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| Protein sequence | MQTTIAQKAQ FRGVGLHSGA AVRLTILPAP ADHGIVFVRT DLDRARIPAN WDHVTPSQLC
TLLDNGRGAT VSTVEHVMAA LSGTGINNAV VEVNGPEVPI LDGSSAPFVQ GILEAGLRQQ
HAPLRAIRVL REVEVQQGEA FARLSPADHL EIHFDIDFVD AAIGHQEKRL DMANGSFVHE
LMDSRTFCRQ ADVVQMQRNG LALGGTYLNA VVVDGDKVLS PGGLRHRDEA VRHKMLDAVG
DLALAGAPLL ARYTGHRAGH AMTNKLLRAL FAQPDAWEWV TLTPAMESRQ PGAGVIASAA
RLAPRARQLA VA
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