Gene Pden_4482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4482 
Symbol 
ID4583032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1696644 
End bp1697519 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content70% 
IMG OID639771789 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_918242 
Protein GI119387187 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01692] 3-hydroxyisobutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.217481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG GATTCATCGG CTTGGGCAAT ATGGGCGGCC CGATGGCGGC CAATCTGGCC 
AAGGCGGGGC ACAAGGTCGC GGGCTTCGAC CTGGCCGCGC CGATGCCCGG GGGCGTCGTC
AAGGCCGCCA GCGCCGCCGA GGCTGCCGCG GGCGCCGAGG TGGTGATCAC CATGCTGCCG
AACGGCGCCA TCCTGCGCGC GGTCGCGGAT GAGATCGTCC CGGCCATGGC CGCGGGCGCG
GTGTTCTGCG ATTGCTCGAC GGTGGACGTG GAAAGCGCCC GCGCGGTGGC CGGGCAGGCG
CAGGCGGCGG GCCTGGGCGC GCTGGACGCG CCGGTCTCGG GCGGGGTCGG CGGTGCCACC
GCCGGCACGC TGACCTTCAT GGTCGGCGGT TCGGCCGAGG CTTTCGACAA GGTGAAGCCG
CTCTTCGACA TCATGGGCCA GAAGGCGGTG CATTGCGGCG AGGCGGGCGC CGGCCAGGCC
GCCAAGATCT GCAACAACAT GATCCTGGGC GTGACCATGA TCGCCACCTG CGAGGCATTT
GCGCTGGCCG ACAAGCTGGG GCTGGACCGC GCGAGGATGT TCGACGTGGT ATCGACCTCC
TCGGGCTATA GCTGGTCGAT GAACGCCTAT TGCCCTGCGC CGGGGGTGGG GCCGGCGTCG
CCTGCCGACA ACGGCTACAA GCCGGGCTTC GCCGCCGAGC TGATGCTCAA GGATCTGCGG
CTGTCCCAGC AGGCCGCCGA GGCCGCGGAT GCCGACACGC CGATGGGCGA ACTGGCCGCC
GCGCTCTATG CCCGCTTCGT CGAGGACGAG GACGGAAAGG GCCGCGATTT CTCGGCCATG
CTGCCCAGAT TCGAGGCTCG GCACCGGCAG GGCTGA
 
Protein sequence
MKIGFIGLGN MGGPMAANLA KAGHKVAGFD LAAPMPGGVV KAASAAEAAA GAEVVITMLP 
NGAILRAVAD EIVPAMAAGA VFCDCSTVDV ESARAVAGQA QAAGLGALDA PVSGGVGGAT
AGTLTFMVGG SAEAFDKVKP LFDIMGQKAV HCGEAGAGQA AKICNNMILG VTMIATCEAF
ALADKLGLDR ARMFDVVSTS SGYSWSMNAY CPAPGVGPAS PADNGYKPGF AAELMLKDLR
LSQQAAEAAD ADTPMGELAA ALYARFVEDE DGKGRDFSAM LPRFEARHRQ G