| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4478 |
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| Symbol | |
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| ID | 4583028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1691868 |
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| End bp | 1692761 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639771785 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_918238 |
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| Protein GI | 119387183 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.515823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTGGG ACGACCTGCG CATCTTTCTG GCCGTGGCGC GCGCCGACAG CCTGTCGGGG
GCCGGTCGCC GGCTCGGCAT CGACGCCTCG ACGGTGGGCC GGCGGGTGGC GCGGCTGGAA
GGCGCGCTGG GGGCCAAGCT TTTCGTCAAG ACGCCGCAGG GCTATGCGCT GGCGCCCGAG
GGCGAGCGGC TGCTTCCCCA TGCCGAGGCG GTCGAGGCGG CGCTGAGCGG TGCCGAAGAG
GCGCTGAGCG GGCCGGGCGA CCTGACGGGA CAGCTGCGCA TCGGCGCGCC GGACGGCTGC
GCGAACTATC TTTTGCCGCA GGTCTGCGCG CGCCTTTCCG AGGCGCATCC GCAGCTGGAG
ATCCAGATCG TCGCGCTGCC GCGGGTCTTC AACCTGTCCA AGCGCGAGGC GGACATGGCC
ATCGCCGTTT CGCAGCCGCA GGCGGGGCGG CTGGTGGTGC AGCGGCTGAC CGACTATCAG
CTGCACCTGG CGGCGCATGA GGATTACCTG CGCGCCCATC CGCCGATCCG CTCGCGCGAG
GATCTGCGCG GTCATCGCAT GATCGGCTAT ATCGCCGACA TGATCTTCGA CCGCGAACTG
GATTACCTGA CCGAGACGGG CGCGGAATGG GCGGCGCTGA CCTCGAACTC GGTCTCGGTG
CAGATGCAGG CGATCCGGGT GGGGGCGGGG CTGGGCATCG TGCACGACTT TGCGATTCCC
TTTTGCCCCG GCGTGCGGCG GGTTCTGGCA GACCAGATTT CGCTCAGGCG CAGCTTCTGG
CTGATCCGGC ACGCCGACGA CCGCCGCTCG CAGCGGATGA ACCGGCTGGC GGATGCGCTG
GCGCAGGGCA TCCGGGCCGA GGTGGCGCGG CTTCAGGCGC TTGTCGTCCC TTGA
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| Protein sequence | MDWDDLRIFL AVARADSLSG AGRRLGIDAS TVGRRVARLE GALGAKLFVK TPQGYALAPE
GERLLPHAEA VEAALSGAEE ALSGPGDLTG QLRIGAPDGC ANYLLPQVCA RLSEAHPQLE
IQIVALPRVF NLSKREADMA IAVSQPQAGR LVVQRLTDYQ LHLAAHEDYL RAHPPIRSRE
DLRGHRMIGY IADMIFDREL DYLTETGAEW AALTSNSVSV QMQAIRVGAG LGIVHDFAIP
FCPGVRRVLA DQISLRRSFW LIRHADDRRS QRMNRLADAL AQGIRAEVAR LQALVVP
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