Gene Pden_4475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4475 
Symbol 
ID4583025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1689816 
End bp1690679 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID639771782 
Producthypothetical protein 
Protein accessionYP_918235 
Protein GI119387180 
COG category[S] Function unknown 
COG ID[COG5473] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTGA CCGATTCGGA CCCCAAACCC ATTCCCACCC CGATTCCCGA TCCCGAGCGG 
GAGCCGCTGC CCGACCCCTT GCCCGATCCG GGCCCGGACG AGATCCCGCT GCCGGCGGTG
ATCGGCCTTG ACGCCATTCC GGCGGTGCTG GCGGCGGGCT GGCGGGATTT CCGCCGCGCC
CCCGCCTTTG GCCTGCTGTT CGCGGCCTTC TATGTCATGG GCGGGCTGGT GCTGACTACG
GTCGCCACGG CTGCGGGGCA GGAATGGTGG TTGATGCCCT TCGTCGTCGG CTTTCCGCTG
ATCGCGCCCT TTGCCGCCGT CGGTCTTTAC GAGGTCAGCC GGCGCATCGA ATCGGACCGG
CCGCTGATCT GGCGCGAGGT GCTGGCCGTC GTCATCGCGC AAAAGGACCG GCAGGTGCCC
TCGATGGCCA TGGTCATCCT GTTGATGTTC ATGTTCTGGG TCTTTGTCGC CCATACCATC
TTTGCGCTGT TCATGGGCGT TTCGGCGCTG ACCAACATCA CCTCCTCGCC CGAGGTGCTG
TTGCAGGGCC GCGGCCTGGT CATGCTGGTG GCAGGGACGG CGATCGGTGC GGGCTTTGCG
GCGCTGCTGT TCTCGATCAC CGTGGTCGGG CTGCCGCTGA TCCTGGACCG CGAGGTGGAC
CTGGCCTCGG CCATCATCGC CAGCTTTCAG GCGGTCGGGG CCAATCTGCC GGTCATGCTG
TCCTGGGCGC TGGTGATCGC CACGTTGCTG TTTGCCGGCA TCGTGCCGCT GTTCCTGGGG
CTGTTCATCG TGCTGCCGGT GCTGGGCCAT GCCAGCTGGC ACATGTATCG CCTGCTGATG
CCGGACGCCG AGCCGATGTC ATGA
 
Protein sequence
MVVTDSDPKP IPTPIPDPER EPLPDPLPDP GPDEIPLPAV IGLDAIPAVL AAGWRDFRRA 
PAFGLLFAAF YVMGGLVLTT VATAAGQEWW LMPFVVGFPL IAPFAAVGLY EVSRRIESDR
PLIWREVLAV VIAQKDRQVP SMAMVILLMF MFWVFVAHTI FALFMGVSAL TNITSSPEVL
LQGRGLVMLV AGTAIGAGFA ALLFSITVVG LPLILDREVD LASAIIASFQ AVGANLPVML
SWALVIATLL FAGIVPLFLG LFIVLPVLGH ASWHMYRLLM PDAEPMS