Gene Pden_4453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4453 
Symbol 
ID4583003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1664120 
End bp1665328 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content69% 
IMG OID639771760 
Productmajor facilitator transporter 
Protein accessionYP_918213 
Protein GI119387158 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.271765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG TTCCCCCCGT TCCGCCATCC GAGGCCAGCC GCGCGCTGGG CCTCTCGACC 
TTCGCCTTTA CCATCTGCTT CGCCGTCTGG ACGATCTTCT CGATCATCGG CCTGCAGATC
CGCGAGCAGC TTTCCCTGAC CGAAACCCAG TTCGGCCTGC TGATCGGCCT GCCGATCCTG
ACCGGATCGC TGGTGCGCAT CGGGCTGGGC GTGCTGACCG ACCGGCTGGG CGGGCGGCTG
GTCTATACGA TGACCATGCT TTCCGCCGCC GTCGCGACGT TCCTTTTGTC CCTTGCTACG
ACCTGGCCGC AGATGCTGCT GGCGGCGCTG GGCGTCGGGC TGGCCGGCGG TTCCTTTGCC
GTCGGCGTGG CCTATGTCTC GCGCTTCTAT GCCGAGGGGC GGCAGGGCAC GGCGTTGGGC
ATCTTCGGCA CCGGCAATGT CGGGGCCGCC GTGACCAAGT TCGCCGCGCC CTTCGTCATG
CTGGCGCTGG GCTGGCAGGC GACCGCGCAG ATCTGGGCCG CCGCGCTGGT GCTGACCGCC
GTGCTGTTCT GGCTGCTCAG CAAGGACGAT CCCGTCACCG CCGCAGGGGC CGGCCGCAAG
GCGCCGCTGC GTGCCGAGTT CGCGCCGCTG GGTCAGGTGC GGGTCTGGCG CTTCTCGGCC
TATTACTTCT TCAGCTTCGG CGGGTTCGTG GCGCTGGCGC TGTGGCTGCC GCATTACCTG
ACGCAGGTCT ATGGTTTCGG TGTCGGGACC GCCGGCATGA TCGGCGCGGC CTATTCCATC
CCCGGCTCGA TCTTCCGCGC CTATGGCGGG GTGCTGTCCG ACCGGATCGG GGCGCGGGCG
GTGATGTATG CGACCTTCAT CGTCTCGCTG GCCGCGACCG CCATCCTGTC GATCCCGGCG
GGGGTGCCGG TGCCGGTCTT CCTGGCGGTG ATTTTCGTCC TGGGCTTCTT CATGAGCCTG
GGCAAGGCGG CCGTCTACAA GCACATCCCC AGCTATTACC CCGGCCATGT CGGCGCGGTC
GGCGGGCTGG TCGGCATGAT CGGCGGTCTG GGCGGCTTTG CCTTGCCGCT GCTCTTCGGC
TGGCTGCGCG ACCAGACCGG GCTGTGGTCC AGCTGCTTCA TGGCGCTGTT CCTGCTGGTC
GGGCTTTGCG CGCTGTGGAT GCACGCCTCG ATCCGCCAGA TGGGCCGCGC GCCCCTGCAA
GCCGCCTGA
 
Protein sequence
MPAVPPVPPS EASRALGLST FAFTICFAVW TIFSIIGLQI REQLSLTETQ FGLLIGLPIL 
TGSLVRIGLG VLTDRLGGRL VYTMTMLSAA VATFLLSLAT TWPQMLLAAL GVGLAGGSFA
VGVAYVSRFY AEGRQGTALG IFGTGNVGAA VTKFAAPFVM LALGWQATAQ IWAAALVLTA
VLFWLLSKDD PVTAAGAGRK APLRAEFAPL GQVRVWRFSA YYFFSFGGFV ALALWLPHYL
TQVYGFGVGT AGMIGAAYSI PGSIFRAYGG VLSDRIGARA VMYATFIVSL AATAILSIPA
GVPVPVFLAV IFVLGFFMSL GKAAVYKHIP SYYPGHVGAV GGLVGMIGGL GGFALPLLFG
WLRDQTGLWS SCFMALFLLV GLCALWMHAS IRQMGRAPLQ AA