Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4451 |
Symbol | |
ID | 4583001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1661340 |
End bp | 1661675 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639771758 |
Product | nitrite reductase (NAD(P)H), small subunit |
Protein accession | YP_918211 |
Protein GI | 119387156 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.468725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTTT TCATCGATAT CGGAGCCCTG GAGGACATTC CCCGGCAGGG CGCGCGCGTG ATCCGCACCG CGCAGGGCTG CGTCGCGGTG TTCCGCACCA TGGACGACCG GGTCTTTGCG CTGGACGACC GTTGCCCGCA CAAGGGCGGC CCGCTGTCCG AGGGCATCGT GCATGGCGAT CGCGTGACCT GCCCGCTGCA CAACTGGGTG TTCGACATGA ACTCGGGCAC CGCGCAGGGG GCCGACGAGG GCGCGGTCCG CACCTGGCCC GTGCGCGTCG AACAGGGCCG CATCCTGATC AGCGCCGAAC TCGTCTCGCG CCCCCGCGCC GCCTGA
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Protein sequence | MTVFIDIGAL EDIPRQGARV IRTAQGCVAV FRTMDDRVFA LDDRCPHKGG PLSEGIVHGD RVTCPLHNWV FDMNSGTAQG ADEGAVRTWP VRVEQGRILI SAELVSRPRA A
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