Gene Pden_4447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4447 
Symbol 
ID4582997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1655608 
End bp1656621 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content65% 
IMG OID639771754 
Productextracellular solute-binding protein 
Protein accessionYP_918207 
Protein GI119387152 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.181234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTCG GACTATCTGG ACTGATCGGT GCCGTGCTTG CTGCGCAGGC GGTTGCCGCA 
AGCGCCCAGG AACTGAACCT TTACACCACG CGCGAGCCGA ATCTGATCGA GCCGCTGCTG
GCCTCGTTCA CCGAAACGAC CGGGGTGAAG GTCAATACCA TCTTCCTCAA GGACGGCCTG
CCCGAGCGGG TCGAGCAGGA GGGCGAGGCC TCGCCCGCCG ACGTGCTGAT GACCGTGGAC
ATCGGCAACC TGGTCGATCT GGTCGATCGC GGCCTGACCC AGCCCGTCGA ATCCGAGGCG
CTTTCCGCCG CCATCCCCGA GAACCTGCGC GACAAGGACG GCAACTGGTT CGCGCTGTCG
CAGCGGGCGC GGGTGCTTTA CGCCGAGAAG GACCTGGATC TTGCGAGCTT TACCTATGAA
GACCTCGCCA AGCCGGAATG GAAGGGCAAG GTCTGCATCC GCTCGGGGCA GCATCCCTAC
AACGTGGCGC TGACCGCCTC CTACATCGTG CATCACGGCG AAGAGGCCGC CAAGACCTGG
CTGGAGGGCG TCAAGGCGAA CCTGGCCCGC ACCGCCGGCG GCGGCGACCG CGACGTGGCC
CGCGACATCA TGGGCGGCAT CTGCGAGATC GGCATCGCCA ATTCCTACTA TGTCGGCCTG
ATGCGCAGCG GCGCCGGCGG TCCCGAACAG GAGGAGTGGG TCAAGGCGAT CAAGGTCGTC
CTGCCCACCT TCGAGGATGG CGGCACGCAG GTGAACGTCT CGGGCGCGGC GGTGGCCAAG
AATGCCCCGA ACCGCGACCA GGCGGTGCAA CTGCTGGAAT ACCTGGTCTC GGACGAGGCG
CAAAAGATCT ATGCCGAGGC GAATTTCGAA TATCCGGTCA AGCCCGGCGT CGCGGTCAGC
CCGGTGATCG AGGATATTGC CGATCTCAAG GTGGACGGCA CCGACCTGAC CGAGATCGCC
CGCCAGCGCA AGGCGGCGAG CGAACTGGCC GAGGCGGTGG GCTTCGACAA CTGA
 
Protein sequence
MRLGLSGLIG AVLAAQAVAA SAQELNLYTT REPNLIEPLL ASFTETTGVK VNTIFLKDGL 
PERVEQEGEA SPADVLMTVD IGNLVDLVDR GLTQPVESEA LSAAIPENLR DKDGNWFALS
QRARVLYAEK DLDLASFTYE DLAKPEWKGK VCIRSGQHPY NVALTASYIV HHGEEAAKTW
LEGVKANLAR TAGGGDRDVA RDIMGGICEI GIANSYYVGL MRSGAGGPEQ EEWVKAIKVV
LPTFEDGGTQ VNVSGAAVAK NAPNRDQAVQ LLEYLVSDEA QKIYAEANFE YPVKPGVAVS
PVIEDIADLK VDGTDLTEIA RQRKAASELA EAVGFDN