Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4438 |
Symbol | |
ID | 4582988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1646393 |
End bp | 1647178 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639771745 |
Product | hypothetical protein |
Protein accession | YP_918198 |
Protein GI | 119387143 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4813] Trehalose utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.319512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCC GTGTCACTGT CTGGGGCGAG AACGTCCACG AGCAGAAGAA CAAGACCGTC GCGGGGATCT ACCCGGACGG CATGCACAAC ACCATTGCCG GGGCGCTGAA CCGCGATGCC GGCATCGCGG CCGGCAGCGT CACCCTGCAA GACCCCGAGC ATGGGCTGAC GGCCGAGAAG CTGGCCGAAA CCGACGTGCT GATCTGGTGG GGCCATTGCG CCCATGGCGA GGTGCAGGAT GCGGTGGTCG AGCGCGTGGC CGAGGCGGTC TGGTCCGGCA TGGGCATGAT CTTCTTGCAT TCGGCGCATT TCTCCAAGCC GTTCAAGCGG CTGATGGGCA CGCCCTGCAA CCTGACCTGG CGCGAGGCGG GCGAACGCGA GCGGCTGTGG CTGACCTCGC GCAACCATCC CATCGCCGCC GGCCTGCCCG ATCATTTCGA GCTGGAGCAC GAAGAGATGT ATGGCGAGCC CTTTGGCGTG CCCGAGCCGC TGGAGACGGT CTTCGTCAGC TGGTTCGCGG GCGGCGAGGT GTTCCGCTCG GGCTTGACCT ACAAGCGCGG GGCCGGCAAC GTATTCTATT TCCGGCCCGG CCACGAGACC TATCCGACCT ATCACGACGC CAATGTGCAG CGGGTGATCC TGAACGCGGT GAAATGGGCG CATAACCCGG CCATGCGGCT GGCCGAGCCG ACCGTCGCGC CCAATGTCCC GGTCGAGCAG GCGCTGGAGC CGATCGAGGA ACGCGGCCCC AAGCTGCATG CCGCCGGCGA AGAGGGCTAT CGCTGA
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Protein sequence | MTIRVTVWGE NVHEQKNKTV AGIYPDGMHN TIAGALNRDA GIAAGSVTLQ DPEHGLTAEK LAETDVLIWW GHCAHGEVQD AVVERVAEAV WSGMGMIFLH SAHFSKPFKR LMGTPCNLTW REAGERERLW LTSRNHPIAA GLPDHFELEH EEMYGEPFGV PEPLETVFVS WFAGGEVFRS GLTYKRGAGN VFYFRPGHET YPTYHDANVQ RVILNAVKWA HNPAMRLAEP TVAPNVPVEQ ALEPIEERGP KLHAAGEEGY R
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