Gene Pden_4438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4438 
Symbol 
ID4582988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1646393 
End bp1647178 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID639771745 
Producthypothetical protein 
Protein accessionYP_918198 
Protein GI119387143 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4813] Trehalose utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.319512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCC GTGTCACTGT CTGGGGCGAG AACGTCCACG AGCAGAAGAA CAAGACCGTC 
GCGGGGATCT ACCCGGACGG CATGCACAAC ACCATTGCCG GGGCGCTGAA CCGCGATGCC
GGCATCGCGG CCGGCAGCGT CACCCTGCAA GACCCCGAGC ATGGGCTGAC GGCCGAGAAG
CTGGCCGAAA CCGACGTGCT GATCTGGTGG GGCCATTGCG CCCATGGCGA GGTGCAGGAT
GCGGTGGTCG AGCGCGTGGC CGAGGCGGTC TGGTCCGGCA TGGGCATGAT CTTCTTGCAT
TCGGCGCATT TCTCCAAGCC GTTCAAGCGG CTGATGGGCA CGCCCTGCAA CCTGACCTGG
CGCGAGGCGG GCGAACGCGA GCGGCTGTGG CTGACCTCGC GCAACCATCC CATCGCCGCC
GGCCTGCCCG ATCATTTCGA GCTGGAGCAC GAAGAGATGT ATGGCGAGCC CTTTGGCGTG
CCCGAGCCGC TGGAGACGGT CTTCGTCAGC TGGTTCGCGG GCGGCGAGGT GTTCCGCTCG
GGCTTGACCT ACAAGCGCGG GGCCGGCAAC GTATTCTATT TCCGGCCCGG CCACGAGACC
TATCCGACCT ATCACGACGC CAATGTGCAG CGGGTGATCC TGAACGCGGT GAAATGGGCG
CATAACCCGG CCATGCGGCT GGCCGAGCCG ACCGTCGCGC CCAATGTCCC GGTCGAGCAG
GCGCTGGAGC CGATCGAGGA ACGCGGCCCC AAGCTGCATG CCGCCGGCGA AGAGGGCTAT
CGCTGA
 
Protein sequence
MTIRVTVWGE NVHEQKNKTV AGIYPDGMHN TIAGALNRDA GIAAGSVTLQ DPEHGLTAEK 
LAETDVLIWW GHCAHGEVQD AVVERVAEAV WSGMGMIFLH SAHFSKPFKR LMGTPCNLTW
REAGERERLW LTSRNHPIAA GLPDHFELEH EEMYGEPFGV PEPLETVFVS WFAGGEVFRS
GLTYKRGAGN VFYFRPGHET YPTYHDANVQ RVILNAVKWA HNPAMRLAEP TVAPNVPVEQ
ALEPIEERGP KLHAAGEEGY R