| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4437 |
|---|
| Symbol | |
|---|
| ID | 4582987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1645344 |
|---|
| End bp | 1646393 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639771744 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_918197 |
|---|
| Protein GI | 119387142 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.902266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCGGC TTCTCGTCAT CGGCACCGGC GGCATGGCGG CGAACCATGC CCGCGCCTTT
GCCGCCATTC CCGGCGTCGA GCTGGTCGGC GGCGTGGACC CCAGGCCCGG GCCGCTGGCC
GCCTTCAACG CCGAACATGG CATCGCGCGC GGCTTCGCCA GCCTGGACGA GGCGCTGGCC
TGGGGCGGGT TCGACGCCGC GACCAACGTG ACGCCGGATG CCGCGCATTA TCCGACCACC
ATGCCGCTCT TGGCGGCGGG CAAGCATGTG CTTTGCGAAA AGCCGCTGGC CACCAATGCC
GCGGATGCCG GGGCCATGGC CGAGGCGGCG GCGCGGGCCG GCGTGGTGAA CATGGTCAAT
CTCAGCTATC GCGACGTGCC GGCGCTGCAA AAGGCCGCCG CGATGGTGCA CGCGGGCGAT
ATCGGCACGG TGCGGCATTT CGAGGCGAGC TATCTGCAAA GCTGGCTGAC CCAGCCCAGC
TGGGGCGACT GGCGGACCGA CCCGAAATGG CTGTGGCGGG TTTCGACCGC GCATGGCTCC
AAGGGGGTGC TGGGCGATGT CGGCATCCAT ATCCTCGATT TCGCTACCTA TGTCGCCGGG
CAGGACGCGG CGCAGGTTTC CTGCCTGCTC AAGACCTTCG ACAAGGCGCC GGGCGGGCGG
ATCGGGGATT ATGTGCTGGA CGCCAACGAC AGCGCCACCA TGCAGATCGT GCTGGAAAAC
GGCGCGCTGG GGACGGTGGC GGCGACGCGC TTTGCCACCG GGCACCTCAA TGACCTGCGG
CTGCGGCTTT ATGGCGACCG GGGCGGGCTG GAGGTCGGCT TCGAGAACCG CGTGAGCCGG
CTGCGCGCCT GCCTGTCGCC GGACCTGGAA ACCGCCGCCT GGCACGAGGT CGAATGCCCG
CCGGTGCCGA CGATCTACCA GCGCTTCGTC GCCGCGATCC GGGGCGAGGG CGCGACCGAT
CCCGATTTCG CCCGCGGCGC GGCGCTGCAA CGCCTGCTGG ACCGGGCCGA GGAATCCTCG
GTCGAGGCCG GCCTCGGCCT CGCCGTCTAG
|
|---|
| Protein sequence | MVRLLVIGTG GMAANHARAF AAIPGVELVG GVDPRPGPLA AFNAEHGIAR GFASLDEALA
WGGFDAATNV TPDAAHYPTT MPLLAAGKHV LCEKPLATNA ADAGAMAEAA ARAGVVNMVN
LSYRDVPALQ KAAAMVHAGD IGTVRHFEAS YLQSWLTQPS WGDWRTDPKW LWRVSTAHGS
KGVLGDVGIH ILDFATYVAG QDAAQVSCLL KTFDKAPGGR IGDYVLDAND SATMQIVLEN
GALGTVAATR FATGHLNDLR LRLYGDRGGL EVGFENRVSR LRACLSPDLE TAAWHEVECP
PVPTIYQRFV AAIRGEGATD PDFARGAALQ RLLDRAEESS VEAGLGLAV
|
|---|
| |