Gene Pden_4430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4430 
Symbol 
ID4582980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1637767 
End bp1638618 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content71% 
IMG OID639771737 
Productnicotinate-nucleotide pyrophosphorylase 
Protein accessionYP_918190 
Protein GI119387135 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.530195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA TGCCCCCGCT GCCCGAGATG ATCCTGGAGC CGCTGCTGCG CGCCGCGCTG 
ACCGAGGATC TGGGCACCTA TGGCGACATC ACCACGCGCA CGGTGATCCC GGCCGGCACC
CGCTACCGGG CGCGGATCGT GGCGCGCGAG GCGGGCGTGG CCTCGGGGAT GCAACTGGCG
GGCATCGCCT TTCGCCTGAT CGATCCGGGC CTGGCATGGC GGCCGCTCCA TCCCGACGGC
AGCCGCTTCC AGCCCGGCGA CACCCTGGCC GAGATCGAGG GCGAGGCGGC CTCGATCCTC
TCGGCCGAGC GGGTGGCGCT GAACTTTGCC GGCCGGCTGT CCGGCATCGC CACGCAGACG
GCGGCATTCG TGGCCGAGAC GGCGGGGACG AAGGCGCGCA TCACCTGCAC CCGCAAGACC
ACGCCGGGGC TGCGGCTGGT CGAGAAGCAG GCGGTCCTGC ATGGCGGCGG CTTCAACCAC
CGCTTCGGCC TGTCGGACGC GATCCTGGTC AAGGACAACC ACATCGCGGC GGCGGGCGGC
ATCCGGCCGG TCCTGCAGGC GATCAAGGCC CGCGCCTCGC ACATGATGCG GGTCGAGATC
GAGGTGGACC GGCTGGACCA GCTTGCCGAG GTGCTGGAGG AGGGCGGCGC CGATGTCGTG
CTGCTGGACA ACATGCAGAC GGCGGAACTG CGCGAGGCGG TCGCCATGAC CGCGGGCCGC
GTGGTGCTGG AAGCCTCGGG CAACATGCGA CTCGCCCGTG TGGCCGAGGT GGCGGCGACG
GGGGTGGACT ACATCTCGGT CGGCGCGCTG ACCCATTCGG CGCGCACGCT GGATCTGGGT
CTGGATTTCT GA
 
Protein sequence
MTEMPPLPEM ILEPLLRAAL TEDLGTYGDI TTRTVIPAGT RYRARIVARE AGVASGMQLA 
GIAFRLIDPG LAWRPLHPDG SRFQPGDTLA EIEGEAASIL SAERVALNFA GRLSGIATQT
AAFVAETAGT KARITCTRKT TPGLRLVEKQ AVLHGGGFNH RFGLSDAILV KDNHIAAAGG
IRPVLQAIKA RASHMMRVEI EVDRLDQLAE VLEEGGADVV LLDNMQTAEL REAVAMTAGR
VVLEASGNMR LARVAEVAAT GVDYISVGAL THSARTLDLG LDF