| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4428 |
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| Symbol | |
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| ID | 4582978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1632907 |
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| End bp | 1635102 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639771735 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_918188 |
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| Protein GI | 119387133 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGA TCGACCCGAA TGAAGTCGCG GATCCCGCGG TGCTGGCCCG CATCGTCGAG
GGACGCTTCG ACGATCCCTT CGCGGTCCTT GGCCCGCATC AGCGGGGCAG CATGCGGCAT
GTCACCGCCT TCGACCCCGG TGCGATCGAG ATGGCGGCCA TGGTGGGCGG CAAGGCGCAT
CCGCTGAACC CGGTCGAGGG CTGTCCGGGC CTGTTTCACG GCAAGGTGCC CGGCGCGGAA
CCCTATCTGC TGCGCGGGCG CCGCGACGGC GAGGAATGGC TGGTCGAGGA TGCCTATCGC
TTCGGCCCGG TCCTGGGCGA GCTTGACGAA TACCTGCTGG GCGAGGGCCG GCACCAGCGG
CTTTGGCAGG CGCTCGGCGC CCATGTGATC GAGCATCAGG GCACGCGCGG CACGCATTTC
GCGGTCTGGG CGCCCAATGC CCGCCGCGTG TCGCTGGTCG GGGATTTCAA CGCCTGGGAC
GGGCGGCGCC ATGTCATGCG CAGGCGCGGC GCGACCGGCG TGTGGGAGAT CTTCATGCCC
GATCTGGGCG AGGGCACGGC CTATAAATAC GAGATCCTCG GTGCCTATGG CGGGCTGGCG
CAAAAGGCCG ATCCGGTCGG CTTCGGCGCC CAGCACCCGC CGGCGACGGC TTCGGTGGTG
CGCGAGATCG CGGGCTATGG CTGGTCGGAT GGCGGCTGGA TGGGCACGCG GGCCGAGGCG
CAACGCATCG ACCGGCCGAT CTCGATCTAC GAGGTGCACC TGGGCAGTTG GCGCAGGAAG
GACGGCGGCC GGCCGATCTC GTATCGCGAG GCGGCGGTGG AACTGGTCGA GTATGCCAGG
GGCATGGGCT TCACCCATAT CGAACTGCTG CCGATCAGCG AATATCCCTT TGACGGCTCA
TGGGGCTATC AGCCGGTCGG GCTGTTCGCG CCGACGATCC GCTTCGGCCC GCCGCACGAG
TTCCGCGACC TGGTGAATGC CGCGCACAAG GCGGGGCTGG GGGTGATCCT GGACTGGGTG
CCGGGGCATT TCCCGACCGA TCCGCACGGG CTGGTGCAGT TCGACGGCAC CGCGCTTTAC
GAACACGCCG ACCCGCGCGA GGGCTTTCAT CAGGACTGGA ATACCCTGAT CTACAATTAC
GGCCGCAGCG AGGTGATGAA CTACCTGACC TCGAACGCGC TTTATTGGCT CAGGGAATAT
CACGTCGACG GGCTGCGGGT GGATGCGGTG GCCTCGATGC TCTACCGCGA CTATTCCCGC
GCCGAGGGGC AATGGGTGCC GAACAAGGAC GGCGGGCGCG AGAATTACGA AGCCATCGCC
ATGCTGCAGG AGATGAACCG CCTGACCTAT GGCGAGGAGC CGGGCATCAT GACGGTGGCC
GAGGAATCGA CCTCATATCC CAGGGTCTCG CGGCCGGTGC ACGAAGGCGG CCTGGGCTTT
GGCTTCAAGT GGAACATGGG TTGGATGAAC GACACGCTGG ATTACATCAA GCGCGAGCCG
ATCCATCGCA AACACCATCA CCACCAGATG ACCTTCGGCC TGCATTACGC CTTTTCCGAG
AATTTCATCC TGTCGATCAG CCATGACGAA GTGGTGCACG GCAAGGGCTC GATGCTGGCC
AAGATGCCGG GCAGCGAATG GGAGAAATTC GCCAACCTGC GCGCTTATTA CGGCTTCATG
TGGGGCCATC CGGGCAAGAA GCTGTTGTTC ATGGGCCAGG AATTCGCCCA AGGCTCGGAA
TGGAACCACG ACGCCGAGAT CGACTGGGCC TGCATCGGCA ACCCGCTGCA TTACGGCATG
CAATTGCTGG TGCGCGACCT GAACGCGATA TATTGCGCCA CGCCCGCGCT TTACGCGCGT
GATTGCGACG GCGCGGGCTT CCAGTGGATC GAGGCCAACG ACGCCGCCCA TTCGATCTAT
GCCTGGGTGC GGCGCGGGGG GCCGGGCGAC CCCGAGGTGG TGGTGGTCTG CAACTTCACC
CCGGTCGAAC GCAGCGGCTG GCGCATGGGC TTTCCGCAGG CGGGCCTGTG GCGCGAGGTG
CTGAACACCG ATGCCGAGGT CTATGGCGGG GCCGGGCGCG GCAATCTGGG CCGTATCTCT
GCCCTGCCGG GCGAGAGCCA TGGCCAGCCC GCCCATGCGG AACTGGTGCT GCCGCCGCTT
TCGACGCTGA TCTTCATCAA GGACGACAAG ACGTAA
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| Protein sequence | MAQIDPNEVA DPAVLARIVE GRFDDPFAVL GPHQRGSMRH VTAFDPGAIE MAAMVGGKAH
PLNPVEGCPG LFHGKVPGAE PYLLRGRRDG EEWLVEDAYR FGPVLGELDE YLLGEGRHQR
LWQALGAHVI EHQGTRGTHF AVWAPNARRV SLVGDFNAWD GRRHVMRRRG ATGVWEIFMP
DLGEGTAYKY EILGAYGGLA QKADPVGFGA QHPPATASVV REIAGYGWSD GGWMGTRAEA
QRIDRPISIY EVHLGSWRRK DGGRPISYRE AAVELVEYAR GMGFTHIELL PISEYPFDGS
WGYQPVGLFA PTIRFGPPHE FRDLVNAAHK AGLGVILDWV PGHFPTDPHG LVQFDGTALY
EHADPREGFH QDWNTLIYNY GRSEVMNYLT SNALYWLREY HVDGLRVDAV ASMLYRDYSR
AEGQWVPNKD GGRENYEAIA MLQEMNRLTY GEEPGIMTVA EESTSYPRVS RPVHEGGLGF
GFKWNMGWMN DTLDYIKREP IHRKHHHHQM TFGLHYAFSE NFILSISHDE VVHGKGSMLA
KMPGSEWEKF ANLRAYYGFM WGHPGKKLLF MGQEFAQGSE WNHDAEIDWA CIGNPLHYGM
QLLVRDLNAI YCATPALYAR DCDGAGFQWI EANDAAHSIY AWVRRGGPGD PEVVVVCNFT
PVERSGWRMG FPQAGLWREV LNTDAEVYGG AGRGNLGRIS ALPGESHGQP AHAELVLPPL
STLIFIKDDK T
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