Gene Pden_4427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4427 
SymbolglgC 
ID4582977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1631601 
End bp1632863 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content64% 
IMG OID639771734 
Productglucose-1-phosphate adenylyltransferase 
Protein accessionYP_918187 
Protein GI119387132 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0448] ADP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR02091] glucose-1-phosphate adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCAGC GTGAGGAAAG GCTTTCCAGA AGATCCATGG CCTTCATTCT GGCCGGCGGA 
CGCGGCTCGC GCCTGCGCGA ACTGACCGAC AAGCGGGTCA AGCCGGCGGT CTATTTCGGC
GGCAAGTCGC GGATCATCGA CTTTGCGCTG TCGAACGCGC TGAACTCGGG CATCCGCAAG
ATGGCGCTGG CCACGCAATA CAAGGCCCAC AGCCTGATCC GCCATGTCCA GCGCGGCTGG
AACTTCTTTC GGGCCGAGCG CAACGAATTC CTGGACATCC TGCCCGCGTC CCAGCGCTAC
GACGAGTCGA TGTGGTATCG CGGCACCGCC GACGCCGTGG CCCAGAACAT CGACATCATC
GACAGCTACG GCGTGGATTA CGTCCTGATC CTGGCCGGCG ACCATATCTA CAAGATGGAT
TACGAGTTGA TGATCCGCCA CCATGTCGAG GCGGGCGCGG ACGTGACCAT CGGCTGCCTG
ACCGTGCCGC GGGCCGAGGC CTCGGCCTTC GGGGTCATGG CGGTGGACGG CAAGGACGTC
ATCACCAGTT TCCTGGAAAA GCCCAAGGAC CCGCCCGGCA CGCCCGACGA CCCGGATGTG
ACGCTGGCCT CGATGGGCAT CTATGTGTTC CGCTGGGATT TCCTGCGCGA CCTGTTGATC
CGCGACATGC AGGACGACAA TTCCAGCCAC GATTTCGGCA ACGACCTGAT CCCGGCCATC
GTGCGGGACG GCAAGGCGCA GGCGCATCGC TTCGCCGACA GCTGCGTGCG GGCCTCGGGC
GATCCGGTCT ATTGGCGCGA CGTGGGCACG GTCGATGCCT TCTGGCGGGC GAATATCGAC
CTGACCGACT TCAACCCCGA CCTGAACCTG TGGGATCGCG ACTGGCCGAT CTGGACCTAT
TCCGAACTGG TCCCGCCCGC GAAGTTCATC CATGACGAGC CGGACCGCCG CGGCAGCGCC
GTCAGCTCGC TGATCTCGGG CGGCTGCATC ATCTCGGGCA GCGAGATCCG CGAGTCGCTC
TTGTTCACCC AGGTCCACAC CAATTCCTAT TCCAGCCTGG AGCGCGCGGT GGTGCTGCCC
TATGCCAACG TCGCGAGGCA CGCACGCTTG ACCAATGTGG TCATTGACCG CGCCGTCAGA
ATCCCCGAAG GGCTGGTCGT CGGCGAGGAC CCCGACGAGG ACGCGAAATG GTTCCGCGTC
TCGGAAGGCG GCGTCACGCT GATCACGCAG GACATGCTGG ATCGAAGGGA AGCGTCTTTA
TGA
 
Protein sequence
MVQREERLSR RSMAFILAGG RGSRLRELTD KRVKPAVYFG GKSRIIDFAL SNALNSGIRK 
MALATQYKAH SLIRHVQRGW NFFRAERNEF LDILPASQRY DESMWYRGTA DAVAQNIDII
DSYGVDYVLI LAGDHIYKMD YELMIRHHVE AGADVTIGCL TVPRAEASAF GVMAVDGKDV
ITSFLEKPKD PPGTPDDPDV TLASMGIYVF RWDFLRDLLI RDMQDDNSSH DFGNDLIPAI
VRDGKAQAHR FADSCVRASG DPVYWRDVGT VDAFWRANID LTDFNPDLNL WDRDWPIWTY
SELVPPAKFI HDEPDRRGSA VSSLISGGCI ISGSEIRESL LFTQVHTNSY SSLERAVVLP
YANVARHARL TNVVIDRAVR IPEGLVVGED PDEDAKWFRV SEGGVTLITQ DMLDRREASL