Gene Pden_4422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4422 
Symbol 
ID4582972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1624263 
End bp1624601 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content64% 
IMG OID639771729 
Productalkylhydroperoxidase 
Protein accessionYP_918182 
Protein GI119387127 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACA AGGCAAAGAT CGACGGGATG CGCGGCGAAT TGCGGGTAAT GAACAAGGCC 
ATCCCCGACA CCGCCAAGGG CTTCGGCACG CTGTCCAAGG CGGTGCATGA CGGCGGCGTT
CTGGACGTCA AGACCAGGGA ATTCATCGCC CTTGGCATGG CCATCGTCCA GCGTTGCGAA
CCCTGCATCC TGCTTCATGT CGAGGCGCTG ATGAAGGCCG GCGCCACGCG CGAGGAACTG
GGCGACGTGC TGTCCATGGC GATCCAGATG AGCGGCGGGC CGGGCATGAT GTATGCCGGC
CATGCGCTGG CCTGCTGGGA CGAACTGGCC GCCGGCTGA
 
Protein sequence
MSYKAKIDGM RGELRVMNKA IPDTAKGFGT LSKAVHDGGV LDVKTREFIA LGMAIVQRCE 
PCILLHVEAL MKAGATREEL GDVLSMAIQM SGGPGMMYAG HALACWDELA AG