| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4409 |
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| Symbol | |
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| ID | 4582959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1608429 |
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| End bp | 1610177 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639771716 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_918169 |
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| Protein GI | 119387114 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.202059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAC CAAAACCCGA CCCCATCACG CTTTCGGTGG TGCGCGGCGT GTTGGAGACC
ACGCAGCGCG AGATGACGCT GACGCTGGAA CAGACCGCCC GCAGCTCGGT CTTCAACCTC
GCGCATGATT ATTCGACCGC GCTCTTCAAC CACACGCCCG AGATGATCCT GCAAGGCCAG
GACATTCCGA TCCACCTCGG CAGCCTGATC CCGGCGATGA AATCGGTCGC GAACTTCTTT
CAGGGCGACA TCCACGAGGG CGACCTGATC CTGCACAACG ACCCGGCCTA TGGCGGCAGC
CATATCATCG ACACCTGCAT GTATTACCCG GTCTTCTACC AGGGCGAGCT GGTGTTCTGG
ACCGTCTGCA AGGGCCACCT GACCGATGTC GGCGGCCCGG TCCCGGCGGG CTACAACCCC
AACGCGACCG AGATCTATGC CGAGGGGCTG CGCATCCCGC CCGTCAAGCT GTGGGATCGC
GGCAAGCCGC GCCACGACGT GATGAACCTG CTGCTGACCA ACATGCGCGC GCGCCGCGAC
CAGGAGGGCG ACTTCAATGC CCTGATCGGC GCTTGCCAGG TCGGCGCCCG CAACCTGGTC
CGGCTGATGG ACAAATACGG CAAGCAGGTG GTGCAGGACT GCATCGCCGA ACTGCTGGAC
ATGGCCGAGG CGCATATGCG CAAGCTCATC GCGCAGGTGC CCGACGGCAC CTATACCGGC
ACGGCGGTGC TCGAGGATGC GGGCCACGGC TTCGGCGACA TGGACATCAC CGCCACGGTG
ACGATCCAGG GGGACGGCTG CCACATCGCC ATCAGCTCGC CGCCGCAGGT GCCCTATTTC
ATCAACAGCT ACGAAGGCAA CAGCCATTCC GGCGTCTACC TGGGCCTGAT GATGTTCGCG
CAATTGCCGC CGCCCTATAA CGAGGGGCTC TATCGCTGCG TGACCACCGA CATGGGTCCG
CGCGGCACGC TCTGCAACGC GAAATCCCCC GCGCCGCACA TGAACTGCAC CACCACGCCG
ATGGAGACGC TGACCGACGC GGTGCGGCTG GCCTTCGAGC AGGCGGCGCC GGCCAAGGTC
TCGGCCAGCT GGGGCCATGC CAACGGCTGC AACATCGCCG GCTGGGACAA GCGCCATGAC
GAGGAATATG TGACCATGGT GCTGGCCTCG ATCATCTCGG GGGCGGGGGC CACGGCCAGC
CAGGACGGCT GGCACGCCTG CGGGCCGGAA TGCTGCTTCG GCGCGCTGAC TTCGGGCGAT
ATCGAGATGC TGGAACACAG CTATCCGATC ATCATCCACC GCTATTCGCT GATGCAGGAT
TCGGGCGGCG CCGGCCAGTT CCGCGGCGGC TCGGGCACCT GCTGGGAGGT CGAGCCGCTG
GACAGCCCGA TGACGCTGGT CACCTTCGGC GAGGGGCGCC GCATCCCGGC CATGGGTGCG
GCCGGCGCCC GCTCGGCGCT GATCCCGCCC AAGGTCGGCC GGCTCGAGGT GACGCGCAAT
GGCGAGACGC AGGTCATCAC CGAAAACGTC ATCGAGACCA TCCAGCCCGG CGAACGCGCC
GCGAACCGCA ATCCCGGCGG CGGCGGCTAC GGCAACCCCT ATGCCCGCCC GGTCGAGAAG
GTGGTCGAGG ATGTCAGGAA CGGCCTCGTC AGCCTGGAGG GCGCGCGGCT GGATTACGGC
GTCGTCATCG CCGATGCCGC GACGCTTGCC GTCGATCACG CCGCCACCGC CGCCCTGCGC
GCCGCGTAA
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| Protein sequence | MTRPKPDPIT LSVVRGVLET TQREMTLTLE QTARSSVFNL AHDYSTALFN HTPEMILQGQ
DIPIHLGSLI PAMKSVANFF QGDIHEGDLI LHNDPAYGGS HIIDTCMYYP VFYQGELVFW
TVCKGHLTDV GGPVPAGYNP NATEIYAEGL RIPPVKLWDR GKPRHDVMNL LLTNMRARRD
QEGDFNALIG ACQVGARNLV RLMDKYGKQV VQDCIAELLD MAEAHMRKLI AQVPDGTYTG
TAVLEDAGHG FGDMDITATV TIQGDGCHIA ISSPPQVPYF INSYEGNSHS GVYLGLMMFA
QLPPPYNEGL YRCVTTDMGP RGTLCNAKSP APHMNCTTTP METLTDAVRL AFEQAAPAKV
SASWGHANGC NIAGWDKRHD EEYVTMVLAS IISGAGATAS QDGWHACGPE CCFGALTSGD
IEMLEHSYPI IIHRYSLMQD SGGAGQFRGG SGTCWEVEPL DSPMTLVTFG EGRRIPAMGA
AGARSALIPP KVGRLEVTRN GETQVITENV IETIQPGERA ANRNPGGGGY GNPYARPVEK
VVEDVRNGLV SLEGARLDYG VVIADAATLA VDHAATAALR AA
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