| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4406 |
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| Symbol | |
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| ID | 4582956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1602822 |
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| End bp | 1604690 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639771713 |
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| Product | histidine kinase |
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| Protein accession | YP_918166 |
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| Protein GI | 119387111 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.226466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATAG AGCCGGCCTT GCGCAAGCCG GCGGCCGGCC GCTGGCCGCT GGTGCTGTGC
CTTGCCTGCG CGGCCGCCAT CCTCTGGCTG GGGGCGCAGC TTGCCTATCA GCATTACTTC
CGCGAGGGCC ATGCCCGCGC CGCGACCGCG CTGCGGCTGA CGGTGAACGC GCTGACCGCC
GATCTGGCGC GCTACGAGGT GGTGCCGCAA CTGGTCGGCG ACCTGGACCT GATCCACCAG
CTTGCCGCCG ACCCCGGCAA TGCCGCCTTG CGGCAGGAGA CCAACCTGTG GCTGGCCGAG
CAGAACGAGG CGGTGCAGGC ATCCGACATC TATCTGATCC TGCCCGACGG CGAGACCATC
GCCCATTCCG GCTACCTTGG TCCCTCCAGC TTCGTCGGGC AGAACTTCAG CTATCGGCCC
TATGTCATCG ACGCCATGGC GGGCGGGCAG GGGCGGTTCT ACGGCATCGG CACCACCTCC
GGCGTGCGGG GCTATTTCTT CTCGGCTCCG GTGCAGGACG ATGCCGGCCG CATCACCGCC
GTCGTCGCGG TCAAGATCGG CGTGGACCGG ATCGAGGCCT CCTGGCGCGG CAACCAGTAT
CGCGTGCTGG TGACCGACCC CGAAGGCACG GCCTTCCTGT CGTCCGAGCC AAGCTGGCTT
TACCACAGCA TCCGGCCGCT GACGCCGGAA CGGCTGGCGC GCACCGAATC CTCGCGCCGC
TATGCCGGCA CGCCCCTGGC CGAATTGCCG ATCGAGCGGC TGGACCTGCA CGGCGCCCCG
GTCTTTCGCC TGCCGCCCGC GCTTGCAGGG GGTCCCCAGC GCAGCCACGA CTATATCGCC
GCCTCCGAGG ACATGCCGGG CGCGGGCTGG ACGGTGCATG TGCTGCTGGA CAGCGCCGAG
CTGCGGGCCG AGGCGCGGCT GGCGGTGCTG AGCCTCGCGC TGCTCTTGTC GGTCGCGGGC
TTCGGGCTGA TGATGTGGCG CCAGCGCCGC GCGCAGGCGG CCGAGCGGCT GGCCATGCAG
CAATTCGCCA CCGCCGAGCT GGAGCGCCGC GTGGTCGAGC GCACCGCCGA TCTGGCGCGG
GTGAACGACC AGCTCGAACT GGAGATTGCC GAGCGCCGCG CCACCGAGGC CGAGCTGCGC
GCCGCGCAGG CCAGCCTGGT GCAGGTCGGC AAGCTGGCGG CGCTGGGGCA GATGTCGGCC
TCGCTTTCGC ACGAGATCAA CCAGCCGCTG GCGGCGGCGC GCAACTATGC CGACAGCGCC
GCCATCCTGA TCGAGCGTGG CGAACACGCC CGCGCGCGCG AGAACATCGC CCAGATCCTG
TTGCTGGTGG ACCGGATGGC CGCCATCGGC AAGCATCTGC GCCACGCGGC AAGAAAGCCC
GACGATGTGC TGGGCGCGGT GGCGCTGGCC GGGCTGCTGG ACGAAACCCG CACCATCGTC
GCCGCCCGCC TGGCCAGCAG CGGCGCCGAG TTGGAGCTGG ACGTGCCCGC CGACCTGCCG
CCGCTGCGGG CGGGGCCGAC GCGTTTGCAG CAGGTGCTGG TGAACCTGAT CACCAATGCC
GTCGATGCGG TCGAGGGCGG CGCGGATCGC CGCATCACGC TTTCGGCGCG GGCCGAGGGC
GGGCGCGTCG CCATCCGGGT CCGCGACCGC GGGCCGGGCG TGCCGGCGGC CATCGCGGCG
CGCATCTTCG ATCCGTTCTT CACCACCAAG GGCATGGGGG CTGGGCTGGG CCTGGGCCTG
TCGATCACCG CCAATATCGT GCGCGATTTC GGCGGCGAGA TCGCCTGCCG CAACATGCGG
CCCGGCGCCG AATTCTGCGT GGTCCTGCCC GCCGCCGCCG GCGCCGAGGC CGCCGAGACT
GCCGCATGA
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| Protein sequence | MRIEPALRKP AAGRWPLVLC LACAAAILWL GAQLAYQHYF REGHARAATA LRLTVNALTA
DLARYEVVPQ LVGDLDLIHQ LAADPGNAAL RQETNLWLAE QNEAVQASDI YLILPDGETI
AHSGYLGPSS FVGQNFSYRP YVIDAMAGGQ GRFYGIGTTS GVRGYFFSAP VQDDAGRITA
VVAVKIGVDR IEASWRGNQY RVLVTDPEGT AFLSSEPSWL YHSIRPLTPE RLARTESSRR
YAGTPLAELP IERLDLHGAP VFRLPPALAG GPQRSHDYIA ASEDMPGAGW TVHVLLDSAE
LRAEARLAVL SLALLLSVAG FGLMMWRQRR AQAAERLAMQ QFATAELERR VVERTADLAR
VNDQLELEIA ERRATEAELR AAQASLVQVG KLAALGQMSA SLSHEINQPL AAARNYADSA
AILIERGEHA RARENIAQIL LLVDRMAAIG KHLRHAARKP DDVLGAVALA GLLDETRTIV
AARLASSGAE LELDVPADLP PLRAGPTRLQ QVLVNLITNA VDAVEGGADR RITLSARAEG
GRVAIRVRDR GPGVPAAIAA RIFDPFFTTK GMGAGLGLGL SITANIVRDF GGEIACRNMR
PGAEFCVVLP AAAGAEAAET AA
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