Gene Pden_4404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4404 
Symbol 
ID4582954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1600310 
End bp1601284 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content67% 
IMG OID639771711 
Producthypothetical protein 
Protein accessionYP_918164 
Protein GI119387109 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.241057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.342392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACC CGAAGCTTCT GGGCGCGCTT TGCGCCACGA CATTGCTGGT CGCGCCGGCT 
TTCGCGCAGG ACTGGCCGCA GCGCCAGATC ACCATGGTGG TGCCTTTCGC GGCCGGCGGG
CCGACCGATA CGGTGGCGCG CATGGTGGCC GAGCGCATGT CGGCCGACCT GGGCCACCAG
ATCATCGTCG AGAATATCGG CGGCGCCGGC GGCACGCTGG GCGCCGGCAA CGTCGCCAAG
GCCGATCCGG ACGGCTATAC GGTGCTGCTG CACCATATCG GCATGGCGAC CTCGGCCACG
CTTTACCGCA ACCTGGCCTA TGACACGCTG AATGCCTTCG ACTATGTGGG CCTGGTGACC
GAGGTGCCGA TGGTCGTCGT CGCCCGCAAG GATTTCGAGC CCAACGACTT CACGGCGTTC
ATCTCCTACG TCAAGGACAA CGCGGACAAC CTGACGCTGG CCAATGCGGG CATCGGCTCG
GCCTCGCATC TGTGCGGCAT GATGCTGATG TCGGCGCTCG AGGCGCCGCT GGTGACGGTC
CCCTACAAGG GCACCGGCCC GGCGATGACC GACCTGCTGG GCGGGCAGAC CGACATCATG
TGCGACCAGA CCACCAACAC CACGCAGCAG ATCAAGGGCG GCACGATCAA GGCCTATGCC
GTGACCACGC CTGAGCGGCT GGAGCTGTTC CCCGACCTGC CCACGGCGAT GGAAAGCGGG
CTGGACGGCT TCGACGTGTC GATCTGGCAC GGCATCTATA CGCCCAAGGG AACGCCGGCC
GAGGTGAACG AGCGGCTGTC GAAATCCCTG CAATCCGCGC TGGCGGACGA GGGGGTCGTG
AAGGCCATGG CCGACCTGGG CACCGCGCCT TCGCCGGCCG AGGATGCCAC GCCCGCCGCG
CTGCAAGCCA AGCTTGAGGC CGAGATCGCC CGCTGGCAGC CGGTGATCGA GGCCGCGGGC
GTCTACGCCG ACTGA
 
Protein sequence
MAYPKLLGAL CATTLLVAPA FAQDWPQRQI TMVVPFAAGG PTDTVARMVA ERMSADLGHQ 
IIVENIGGAG GTLGAGNVAK ADPDGYTVLL HHIGMATSAT LYRNLAYDTL NAFDYVGLVT
EVPMVVVARK DFEPNDFTAF ISYVKDNADN LTLANAGIGS ASHLCGMMLM SALEAPLVTV
PYKGTGPAMT DLLGGQTDIM CDQTTNTTQQ IKGGTIKAYA VTTPERLELF PDLPTAMESG
LDGFDVSIWH GIYTPKGTPA EVNERLSKSL QSALADEGVV KAMADLGTAP SPAEDATPAA
LQAKLEAEIA RWQPVIEAAG VYAD