Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4402 |
Symbol | |
ID | 4582952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1598266 |
End bp | 1599774 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639771709 |
Product | hypothetical protein |
Protein accession | YP_918162 |
Protein GI | 119387107 |
COG category | [S] Function unknown |
COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00944962 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.211367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGC TCAGCAATCT CGCGCTTGGC TTCTCGGTCG CCTCGTCGCT GGCGAACCTG CTCTTCTGCC TGATCGGCGT GCTTCTGGGC ACGCTGATCG GGGTGCTGCC GGGGATCGGC GCCACGGCGA CCATCGCCAT GCTCTTGCCG ATCACCTTCC AGCTCGAGCC GGTCAGCTCG CTCATCATGC TGGCGGGGAT CTATTACGGC GCGCAATACG GCGGCTCGAC CACCGCGATC CTGATCAACA TGCCGGGCGA AAGCTCGTCC GCCGTCACCG CCATCGACGG CTACCAGATG GCGCGCAAGG GCCGCGCGGG CACGGCGCTG GCCACGGCGG CGCTGGGGTC GTTCTTTGCC GGCACCGTCG CGACCTTCCT GGTCGCGATC TTTGCCCCGC CCCTGACCGC GGTGGCGCTG AAATTCGGCG CGGCCGAGTA TTTCAGCCTG ATGGTCATGG GCCTGGTCAT GTCGGTGGCG CTGGCGCATG GCTCGGTCCT CAAGGCGCTG GCCATGGTGG TGCTGGGCCT GCTTCTGGGC ATCGTCGGCA CCGACATCTA TACCGGCGCG CCGCGTTTCA CCCTGGGCAT CACCCAATAT GCCGACGGGC TGAACTTCGT CGCCGTCGCC GTGGGCGTCT TCGGCATCGC CGAGATCCTG CGCAACCTCG AGGACGAGCA CGACCGCGAG GTGATGACCA AGAACATCAG CCGCCTGTTC CCCAACCGCG AGGAATTCAG GCAGATGATC GGCCCGGTCC TGCGCGGCAC CGGGGTCGGC TCGGTCCTGG GCATCCTGCC GGGCGGGGGC GCGATCCTGG CCAGCTTTGC CTCGTACACG ATCGAGAAGA AGGTCTCTGC CCGGCCGCAG GACTTCGGCA AGGGTGCGCT GGCCGGCGTC GCCGGCCCGG AAAGCGCCAA CAATGCCGGG GCGCAGACCT CGTTCATCCC GCTGCTGACG CTGGGCATCC CGGCGAACCC GGTCATGGCG CTGATGATCG GCGCGATGAT CATCCAGGGC ATCGTGCCGG GGCCGAATGT GGTCAGCGAA CAGCCGGCGC TGTTCTGGGG CATCATCGCC AGCATGTGGA TCGGCAACCT GATGCTGGTG ATCCTGAACC TGCCGCTGAT CGGGCTGTGG GTCAGGCTGC TGACGGTGCC TTACTATGTG CTGTTCCCGA TCATCATGGC GATGTGCTCG ATCGGGGTCT ATTCGGTGGC CTCGAACACC TATGACCTCT ATGCCGTCGC CTTCTTCGGG CTGCTGGGCT ATGTCATGTC CAAGCTGCGC TGCGAGCCGG CGCCCCTGCT GCTGGGCTTT GTCCTGGGCC CGCTGCTGGA AGAGAACCTG CGCCGGGCGA TGATCCTGTC GCGGGGCGAT CCCATGACCT TCCTGACCCG CCCGATCAGC GCCACCCTGC TTTTGATGTC GCTGGCCGTG CTGGTGCTGG TCTTCCTGCC GCAGATCCGC AAGCGCCGGG ACGAGGTCTT TACCGAAAGC GATGCGTAA
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Protein sequence | MELLSNLALG FSVASSLANL LFCLIGVLLG TLIGVLPGIG ATATIAMLLP ITFQLEPVSS LIMLAGIYYG AQYGGSTTAI LINMPGESSS AVTAIDGYQM ARKGRAGTAL ATAALGSFFA GTVATFLVAI FAPPLTAVAL KFGAAEYFSL MVMGLVMSVA LAHGSVLKAL AMVVLGLLLG IVGTDIYTGA PRFTLGITQY ADGLNFVAVA VGVFGIAEIL RNLEDEHDRE VMTKNISRLF PNREEFRQMI GPVLRGTGVG SVLGILPGGG AILASFASYT IEKKVSARPQ DFGKGALAGV AGPESANNAG AQTSFIPLLT LGIPANPVMA LMIGAMIIQG IVPGPNVVSE QPALFWGIIA SMWIGNLMLV ILNLPLIGLW VRLLTVPYYV LFPIIMAMCS IGVYSVASNT YDLYAVAFFG LLGYVMSKLR CEPAPLLLGF VLGPLLEENL RRAMILSRGD PMTFLTRPIS ATLLLMSLAV LVLVFLPQIR KRRDEVFTES DA
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