Gene Pden_4398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4398 
Symbol 
ID4582948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1593677 
End bp1594810 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content73% 
IMG OID639771705 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_918158 
Protein GI119387103 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.833067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.212709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCG ACAATCCCAG CCGCGCGGGA CTGAGCCCCG CCAGCGAGGC CGAGCTTGGC 
GCCCTGATCG CCGAGCGTTT CGCGACCCGC CAACCCCTGC GCATCGCCGG CGGCGGCACC
CGGGTCGAAA CCGGACCCGT GCCGGGCGAG GTGCTTTCGA CCGCCGCGAT CTCGGGCGTC
GTGACCTATG AGCCGGGCGA GATGACGCTG ATCGCCCGTG CCGGCACGCC CTTGGACCAG
ATCGAGCCGA TGCTGGCCGC CGAGGGCCAG GCGCTGGCCT TCGAGCCTGC CGACATGCGC
GGCGTGCTGG GCCGCAATGG CACGCCGACC ATCGGCGGCG TGGTCGCGGC CAATGCCAGC
GGCCCGCGCC GGCTGCTGGC CGGGGCCTGC CGCGACCATC TGCTGGGGGT GCGCTTTGTC
GACGGTCAGG GCCGCGTGCT GAAGAACGGC GGCCGGGTGA TGAAGAACGT CACCGGCCTC
GACCTGGGCA AGCTGATCTG CGGGGCGCAT GGCAGCTTGG GCGTGCTGAC CGAGGTGGCG
CTGAAGACGC TGCCGCACCT GCCCGATCGC TGCACGCTGG GCTTTCACGG CGTCACGGTC
GAGGAGGCGG TGGCGATCTT TTCGACGGCG CTGGCGACCC CTTTCGAGGT TTCGGGCGCC
GCCTTCCGCG ACGGCTCGGC CTGGCTGCGG GTCGAGGGGC TGGGGCCGCA GATGGATTAT
CGCCGCGACC GGCTGCTGGG GCTGCTGAAA CCGCGCGAGG CCGAGGTGCT GGACGGTGCC
GCCACCGTGG CGCTGTGGCG CGACCTGCGC GATCTGGCGC ATTTCGCGGG AACGGACGCG
CCGCTTTGGC GGGTGCTGGT CAAGCCGAGC CTTGCCCCGG CCACGGCGCG GGCCTTGCAG
GCGCTGGGCG GCGAAGTGTC GCTCGACTGG GGCGGCGGGC TGGTCTGGTA TTGTGGACCG
GGCAGCCCGC AGGCGGTGCG GCAGGTCGCC CCCCATGCCA CGCTGGTCCG GCGCGGCGGG
CTTGACGGCC CGGCCTTCCC GCCCGAGGCC CCGCCTGTCG CCCGCCTCTC GGCCGGGTTG
CGCCAAAGGT TCGACCCCGC CGGTATCCTC AACCCCGGCT TGATGGATCG CTGA
 
Protein sequence
MIPDNPSRAG LSPASEAELG ALIAERFATR QPLRIAGGGT RVETGPVPGE VLSTAAISGV 
VTYEPGEMTL IARAGTPLDQ IEPMLAAEGQ ALAFEPADMR GVLGRNGTPT IGGVVAANAS
GPRRLLAGAC RDHLLGVRFV DGQGRVLKNG GRVMKNVTGL DLGKLICGAH GSLGVLTEVA
LKTLPHLPDR CTLGFHGVTV EEAVAIFSTA LATPFEVSGA AFRDGSAWLR VEGLGPQMDY
RRDRLLGLLK PREAEVLDGA ATVALWRDLR DLAHFAGTDA PLWRVLVKPS LAPATARALQ
ALGGEVSLDW GGGLVWYCGP GSPQAVRQVA PHATLVRRGG LDGPAFPPEA PPVARLSAGL
RQRFDPAGIL NPGLMDR