Gene Pden_4385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4385 
Symbol 
ID4582935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1578800 
End bp1579555 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content75% 
IMG OID639771692 
ProductABC transporter related 
Protein accessionYP_918145 
Protein GI119387090 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.426909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.116393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGC TTCGCGCCCT CTCGTTCCAC CGCGCCGGGC AGCCGGTGCT GGACGGTATC 
GACCTGCGGC TGGGGCCGGG CGAGTTCGTC GGCCTGCTCG GCCCGAACGG CGCCGGCAAG
ACCACGCTTC TGCGTGCGGC GCTGGGACTG CTGCCGGCGC GCGGTCACAG CTCGCTGGCC
GCGCTGCCGG TGCGCGAGCG CGCCCGCGCC GCCGCCTATA TGCCACAGGG CCGCGAGATC
GCCTGGCCGA TGCCGGTCGA GGCGCTGGTG GCGCTTGGCC GCATCGCCCA TCCGCATTCC
GCCAGCGCTG CCGACCGCGC CGCCATCGAG CGCGCCATCG CGGCCTTGCA CCTGGACCCG
CTGCGCCACC GCCGCGCGAC CGAGCTGTCG GGGGGCGAAC AGGCGCGAAC GCTGATCGCC
CGGGCGCTGG CACAGGAAAC GCCGCTGCTG ATCGCGGACG AGCCCATCGC CGGGCTGGAC
CCCGCGGCGC AGATCGACGT GATGCGGCTG TTCCGCCGGC TGGCCGGTCA GGGCCATGCG
GTGCTGGCCT CGCTGCATGA CCTGGGGCTG GCGGCGCGGC ATTGCACGCG GCTCGTCATG
CTGCACCAGG GCCGGATCGC CGCCGATGGT CCGCCCGAGG CGGTGCTGAC CGCCCAGAAC
CTCGCCCGCG TCTTCGGCAT CACCGCCCAT GTGGCGCCGG GGCCCGGCGG CATCCTGTTC
CAGCCGCTCG ACACCATCGG GGGCGGCGCC CCGTGA
 
Protein sequence
MLELRALSFH RAGQPVLDGI DLRLGPGEFV GLLGPNGAGK TTLLRAALGL LPARGHSSLA 
ALPVRERARA AAYMPQGREI AWPMPVEALV ALGRIAHPHS ASAADRAAIE RAIAALHLDP
LRHRRATELS GGEQARTLIA RALAQETPLL IADEPIAGLD PAAQIDVMRL FRRLAGQGHA
VLASLHDLGL AARHCTRLVM LHQGRIAADG PPEAVLTAQN LARVFGITAH VAPGPGGILF
QPLDTIGGGA P