| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4381 |
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| Symbol | |
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| ID | 4582931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1572796 |
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| End bp | 1574571 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639771688 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_918141 |
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| Protein GI | 119387086 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.558265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.124287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGC CGCAGATCCT GGCCGTGCTG ATCCTTTGCG CCATGATGGC GATGTTCGTC
TGGGGGCGGC TGCGCTACGA CGTGGTGGCG ATGATCGCGC TCTTGGCCTC GCTGGTGGCG
GGCACGGTCA AGCCGGACGA GGCGTTTCGC GGCTTCAGCG ACGATATCGT CATCATCGTC
GGCAGTGCGC TGGTGGTCAG CGCCGGCATC TCGCGCTCGG GCGTGATCGA GGCGGTGATG
CGCCGCGTGC TCCTGCGGTT GCGCAGGCTG CGCTGGCAGC TTCTGGTGCT GGTCGGCTCG
GTCACCTTCC TGTCGGCGCT GGTCAAGAAC ATCGGCGCGC TGGCCATGCT GATGCCGGCG
GCGCTGAAGA TGGCGCGGCG TTCGAGGCAT TCGCCCTCGG TCTATCTGAT GCCGATGGCC
TTCGGCTCGC TCTTGGGCGG GCTGATCACG CTGGTCGGCA CTTCGCCCAA CATCATCGTC
TCGCGGGTGC GCGAGCAGAT GACGGGCGAG CCCTTCACCA TGTTCGACTA TGCCCCGGTC
GGCATCGGCC TGTCGCTGGT CGGGCTGGTC TTCCTGCAAT TCGCCCATCG CCTGCTGCCC
AGGGACCGCC GCGCCACCGC GTCGTTGAGC GAGGCGGTGA ACATCAGCGA CTATCACACC
GAGGCCACCG TGCCCGAGGG CGCCGGCATC GTCGGCATGA CGGTGGGCGA TTATCTGGGC
GCCGTCGACG GCGAGGTGGC CGTGACCGGC CTCATCCGGG GCGGCGCGCG CCGTGCCGTG
ACGCTGCCCG ACACGGTGAT CGAGACGGGC GACACGCTGC TTTTACGCGG CGAGCCGAAT
GCGCTGGAGC GCGCGGTGAC CAAGCTGGGA ATGGAGCTGA CCCGGCAGGA TGCGGCGGCC
GAAGAGGGAC TGCCCGCCGA CAAGATCGGC GTCATCGAGG CGGTGATCGC GCCCGCCTCG
CTGCTGGTGG GGCAAAGCGT GGGGCGGATC GCGCTGTTCG ACCAGCACGG CGTGAACCTG
ATCGCCATCT CGCGTGCCGG CCATCGCATG ACGCAGCGGC TCAGCCAGAC GGTGCTGGCG
GCGGGCGACG TGCTGCTGGT GCAGGGGCCG ATCGAGCTTT TGCCCGAGCG GATGCGGGTG
CTGGGCCTCT TGCCGCTGGC CGAGCGCGAC ATCCGGCTGG GCGGGGTGCG CAAGCAATTG
CTGCCGGTGC TGATCCTGGC GGTGGCCATG GCGGCGACGG CGGCGGGGCT GGTGCCGGTC
GCCATCGCCT TCTTCGCCGC CGCCGTGCTG ATGATCCTGA CCGGCGCGAT CAGTGCCGAA
GAGGCTTATG AGGCCATCGA ATGGCCTATC CTGATCATGC TGGGCGCGCT GATCCCGGTC
AGCGAGGCGC TGCAAAAGAC CGGCGTGACC GACCTGTTGG GTGCCTGGCT GTCGCAGGCG
GCGATGGGCC TGCCGGCCTG GGGTGCGCTG ACGCTGATCC TGGTCGCGGC CATGGCGGTT
ACGCCGTTCC TGAACAATGC CGCGACGGTG CTGGTCATGG CGCCGATCGC GGCGACCTTC
GCCAGCCAGC TCGGCTATCG GCCCGATGCC TTCCTGATGG CAGTGGCGGT CGGTGCCGGC
TGCGATTTCC TGACCCCCAT CGGGCACCAG TGCAACACGC TGGTCATGGG GCCGGGCGGC
TATCGCTTCG GCGACTACGC CCGGCTGGGT GCGCCGCTGT CGGCGCTGGT CGTGCTGACC
GGCGTGCCGC TGATCCTGCT GGTCTGGCCG GTGTGA
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| Protein sequence | MAMPQILAVL ILCAMMAMFV WGRLRYDVVA MIALLASLVA GTVKPDEAFR GFSDDIVIIV
GSALVVSAGI SRSGVIEAVM RRVLLRLRRL RWQLLVLVGS VTFLSALVKN IGALAMLMPA
ALKMARRSRH SPSVYLMPMA FGSLLGGLIT LVGTSPNIIV SRVREQMTGE PFTMFDYAPV
GIGLSLVGLV FLQFAHRLLP RDRRATASLS EAVNISDYHT EATVPEGAGI VGMTVGDYLG
AVDGEVAVTG LIRGGARRAV TLPDTVIETG DTLLLRGEPN ALERAVTKLG MELTRQDAAA
EEGLPADKIG VIEAVIAPAS LLVGQSVGRI ALFDQHGVNL IAISRAGHRM TQRLSQTVLA
AGDVLLVQGP IELLPERMRV LGLLPLAERD IRLGGVRKQL LPVLILAVAM AATAAGLVPV
AIAFFAAAVL MILTGAISAE EAYEAIEWPI LIMLGALIPV SEALQKTGVT DLLGAWLSQA
AMGLPAWGAL TLILVAAMAV TPFLNNAATV LVMAPIAATF ASQLGYRPDA FLMAVAVGAG
CDFLTPIGHQ CNTLVMGPGG YRFGDYARLG APLSALVVLT GVPLILLVWP V
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