Gene Pden_4370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4370 
Symbol 
ID4582920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1561546 
End bp1562565 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content71% 
IMG OID639771677 
Producthypothetical protein 
Protein accessionYP_918130 
Protein GI119387075 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGA CCGACCAGGG CCAGCAAACA TCTTCCGCGA TCGGGGGCTG GCTGGGCGCC 
ACCCTGCCGG GGCTGGGGCT GACCTTCGGC ATCGCGATCC TTGCCATGGC GGCGCAGAGG
CTTTCGGGCA TACCGGCGCT CAGCCCGCTG GTGGTGGCGA TGGTGCTGGG CATGGCGCTG
CGCAACCTTG TCGGCACACC CGCGGCGGCG CGGCCGGGCA TCGGCTTTTC GCTGCGCCGG
GTGCTGCGTT TCGCCATCGT GCTGCTGGGC TTTCAGCTGA CGCTGGAGCA ATTGCGCGCC
GTGGGCCTGC CGGGGGTGGC GGTGATCGCG GTGGTGCTGG CCGCGACCTT CGTCTTTACC
AGATGGGCCG GCCGGGCATT GGGGGTCGAG GCGCGGCTTG CCGAGCTGAT CGCGGCCGGC
ACCTCGGTCT GCGGCGCCTC GGCGGTGATC GCCACGAACA CGGTCACGCG CGGGACGGAC
GAGGACGTGG CCTATGCCAT CGCCTGCGTG ACGGTCTTCG GCTCGCTCTC GATGCTGGCC
ATGCCGGTGC TGGGCGAGAT GCTGGGGATG GGGCCTTCGC ATTACGGCAT CTGGGTCGGC
GCGACCGTGC ACGAGGTGGC GCAGGTCGTC GGCGCCGGCT TCCAGCATGG CGCCGAGGCG
GGACAGGCCG CGACCGTCGC CAAGCTGAGC CGGGTGATGC TGCTGGCTCC GCTGATCCTG
ATGCTGGGCG CGCTGGCGCG GCGGGGCGGC AAGGCCGCGC ATGGCTCGGC GCCGACGCCC
TGGTTCGTGC TGGGCTTCAT CGCCGTGGTG CTGCTGAACA GCGCCCTGCC CCTGCCCGAG
GCGCTGCATG CCGAGATCGT CGCCCTGACC GCCTTTCTCC TGACGGTGGC GCTGGCCGCG
ATGGGGCTGG AGACCGACAT CCGCAAGCTC TGCGCCAAGG GCGTCCGGCC GCTGGCGCTT
GGCGCGCTGG CCTGGCTGTT CATCTCGGCC CTGGGGCTGG AGCTGGTGGC GCTGATCTGA
 
Protein sequence
MSSTDQGQQT SSAIGGWLGA TLPGLGLTFG IAILAMAAQR LSGIPALSPL VVAMVLGMAL 
RNLVGTPAAA RPGIGFSLRR VLRFAIVLLG FQLTLEQLRA VGLPGVAVIA VVLAATFVFT
RWAGRALGVE ARLAELIAAG TSVCGASAVI ATNTVTRGTD EDVAYAIACV TVFGSLSMLA
MPVLGEMLGM GPSHYGIWVG ATVHEVAQVV GAGFQHGAEA GQAATVAKLS RVMLLAPLIL
MLGALARRGG KAAHGSAPTP WFVLGFIAVV LLNSALPLPE ALHAEIVALT AFLLTVALAA
MGLETDIRKL CAKGVRPLAL GALAWLFISA LGLELVALI