Gene Pden_4368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4368 
Symbol 
ID4582918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1559113 
End bp1560438 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content66% 
IMG OID639771675 
ProductC4-dicarboxylate transporter DctA 
Protein accessionYP_918128 
Protein GI119387073 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATT GGTCCAGGTC CTTGTTTGGA CAGGTTTGCG TGGCACTGGT GCTGGGGGTC 
GTCGCCGGCT TCTTCGCGCC CGAGTTCGCC GCCAAGATGA AGCCGCTTGG GGACGGGTTC
ATCAAGCTCA TCAAGATGCT GATCCCCGTC ATCGTGTTCT GCGTCGTGGT GCATGGCATC
GCCGGCGCGG GCGACCTGAA AAAGGTCGGC AAGGTCGGCG TGCGCGCCAT CATCTATTTC
GAGATCATCA CCACCATCGC GCTGGCCCTG GGCATCGCGG TCGCCTATCT GTTCGGGCCG
GGCCACGGCA TGAACATCGA CGTGAGCCAA CTCGACGCCT CGGCGCTGTC GGCCTATGTC
GAGCGCGCGG ACCAGGTCAC CAGCGGCGGC ACCGTCGACT TCCTGATGAA GCTGATCCCG
ACCACGATGA TCAGCGGCTT CGCACAGGGC GACATCCTGC AGGTGCTGCT GGTCGCGATC
CTGTTCGGCT GCGCGCTGTC GCTGGTGGGC GAACGCGGCA AGCCGCTTCT GCACATGATC
GAGCTGACGG GCGACGTCAC CTTCAAGATC ATGTTCTTCA TCGTCCGGCT GGCGCCGCTG
GGCGTGTTCG GCGCCATCGC CTTCACCGTC GGGCAATACG GCATCGGCTC GCTGGCGCAG
CTGGGCTATC TGGTGGGGCT GTTCTATGTC ACCATCGCCG TGTTCGTCTT CGTGGTGCTG
GGCTTCGTCC TGCGCCTTGC GGGCTTCAGC ATCTTCAAGC TGCTGCGCTA TCTGCGCACC
GAGGTCGGCA TCGTCGCCGG CACGGCCAGC AGCGACGCCG TGCTGCCGCA GACCATGCGC
AAGCTGGAAC ACCTGGGCAT CAAGGACTCG ACCGTGGGGC TGGTTGTGCC GACGGGCTAT
TCCTTCAACC TCGACGCCTT CTCGATCTAC CTGACGCTGG CGGCGGTCTT CATCGCCCAG
GCCACCAACA CGCCGCTGTC GACCACCGAC CTGCTGGCCA TCCTGGGCGT GGCGCTGGTG
ACCTCGAAGG GCGCGCATGG CGTACCGGGC TCGGCCATCG TGATCCTGGC CGCGACGCTG
GCCGCGATCC CGGCGATCCC CGCCATTGGG CTGGTCCTGG TGCTGTCGGT CGACTGGTTC
ATGGGCATCG CCCGGGCGCT GGGGAACTAT CTGGGCAATT GCGTCGCCAC CGTGGTCGTC
GCCTCCTGGG TGGGCGACAT CGACCGCGAC CGCGCCCGCC GCGTCCTGGA AGGCGAGGAC
ATGCCGACGC TGGACGTGCT GGACGAGGAT ACGCCGATGT CCGAGCCCGA GGCCCAGCAC
GGTTGA
 
Protein sequence
MPNWSRSLFG QVCVALVLGV VAGFFAPEFA AKMKPLGDGF IKLIKMLIPV IVFCVVVHGI 
AGAGDLKKVG KVGVRAIIYF EIITTIALAL GIAVAYLFGP GHGMNIDVSQ LDASALSAYV
ERADQVTSGG TVDFLMKLIP TTMISGFAQG DILQVLLVAI LFGCALSLVG ERGKPLLHMI
ELTGDVTFKI MFFIVRLAPL GVFGAIAFTV GQYGIGSLAQ LGYLVGLFYV TIAVFVFVVL
GFVLRLAGFS IFKLLRYLRT EVGIVAGTAS SDAVLPQTMR KLEHLGIKDS TVGLVVPTGY
SFNLDAFSIY LTLAAVFIAQ ATNTPLSTTD LLAILGVALV TSKGAHGVPG SAIVILAATL
AAIPAIPAIG LVLVLSVDWF MGIARALGNY LGNCVATVVV ASWVGDIDRD RARRVLEGED
MPTLDVLDED TPMSEPEAQH G