Gene Pden_4344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4344 
Symbol 
ID4582894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1526809 
End bp1527795 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content66% 
IMG OID639771651 
Productsulfate ABC transporter, periplasmic sulfate-binding protein 
Protein accessionYP_918104 
Protein GI119387049 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1613] ABC-type sulfate transport system, periplasmic component 
TIGRFAM ID[TIGR00971] sulfate/thiosulfate-binding protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0989658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGTG CGGTGGCGAT GATGGTGACC GTGGCCGGGT TGGGCCTGGC CGGCCAGGTC 
CATGCCGACA ATACCCTGCT GAACGTCAGC TACGACCCGA CGCGCGAGCT TTACCGCGAG
GTCAATGCCG CCTTCGCCGC CAAATGGCAG GCCGAGGGAC ATGCCTCGCC GACCATCGAG
ACCTCGCATG GCGGTTCGGG CGCGCAGGCG CGTTCGGTGA TCGACGGGCT CAAGGCGCAG
GTGGTGACGC TGGCTCTGGC CTCGGATATC GACCAGATCG CATCCCGCGG CCTGTTGCCC
GAGGACTGGC AGTCGCGCCT GCCGCATAAC AGCTCGCCCT ATACCTCGAC CATCGTCTTC
CTGGTGCGCG AGGGCAATCC CAAGGGCATC CAGGACTGGG GCGACCTGGT CAAGGAAGGC
GTCGAGGTCA TCACGCCGAA CCCCAAGACC AGCGGCGGGG CGCGCTGGAA CTATCTGGCC
GCCTGGGCCT GGGCGCAGAA GAACGGCCAG GACCCCAAGA CCTTCGTGGG TGAGCTGTTC
CAGCATGTCC CGGTGCTGGA CAGCGGTGCG CGCGGCTCGA CCACCACCTT CACCCAGCGC
GAGATCGGCG ACGTGCTGCT GGCCTGGGAG AACGAGGCCT ATCTGGCGCT GAACGAACTG
GGCGAGGATC GGTTCGACAT CGTCGTGCCC TCGGTCTCGA TCCTGGCCGA GCCGCCGGTG
GCCATCGTGG ACAAGAACAT CGCCGACGAC GAGCAAAAGG CGCTGGCCGA TGCCTATCTG
GCCTTCCTCT ATTCCCCCGA GGGGCAGGCG CTGGCCTACA AGCACTATTA TCGGGCCTGG
GACGACAGTG CCGCCAATCC CGAGGACGTG GCGCGCTTTC CCGAGCTGGA TCTGGTGACC
ATCGCCGATT TCGGCGGCTG GAAACAGGCC CAACCCGAGC ATTTCGGCGA CGGCGGCACC
TTCGACCAGA TCTATTCGGG ACAATGA
 
Protein sequence
MRRAVAMMVT VAGLGLAGQV HADNTLLNVS YDPTRELYRE VNAAFAAKWQ AEGHASPTIE 
TSHGGSGAQA RSVIDGLKAQ VVTLALASDI DQIASRGLLP EDWQSRLPHN SSPYTSTIVF
LVREGNPKGI QDWGDLVKEG VEVITPNPKT SGGARWNYLA AWAWAQKNGQ DPKTFVGELF
QHVPVLDSGA RGSTTTFTQR EIGDVLLAWE NEAYLALNEL GEDRFDIVVP SVSILAEPPV
AIVDKNIADD EQKALADAYL AFLYSPEGQA LAYKHYYRAW DDSAANPEDV ARFPELDLVT
IADFGGWKQA QPEHFGDGGT FDQIYSGQ