Gene Pden_4342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4342 
Symbol 
ID4582892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1525080 
End bp1525973 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content69% 
IMG OID639771649 
Productsulfate ABC transporter, inner membrane subunit CysW 
Protein accessionYP_918102 
Protein GI119387047 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4208] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGACG ACGCGCTGCA CCCCACCCCC GCCACCGCGG GCCGGCCCGC GAAATGGCGC 
CCGGCGACCG AGGAAAGCCG GCTGACCCGC ATCCTCCTGA TCGCCGCGGC GTTGGGCGGG
CTGGCCATCC TGGTCGTGGC GCCGCTGGCC GTGGTCTTTG CCGAGGCCCT TGCGCGCGGC
GCGGCCCAGG CCGTGACCTC GCTGACCCGG CCCGAGGCGA CCTCGGCCAT CCGGCTGACG
CTGATCGTCG CGGCGATCTC GGTGCCGGTG AATGCCGTCT TCGGCATCGC CGCCGCCTGG
ACGATCACCA AGTTCGACTT TCGCGGCAAG GCCTTCCTGA TCACGCTGAT CGACCTGCCG
TTCTCCATCT CGCCGGTGGT GGCGGGGCTG GCGCTGGTGC TCTTGTTCGG CACCAACAGC
CTGATCGGCG GCTGGCTGGT CGCCAGCGGC TTCCCGATCA TCTTCGCCCT GCCGGGGATC
GTGCTGGCCT CGATCTTCGT CACCTTCCCC TTCGTCGCGC GCGAGCTGAT CCCGGTGATG
ATCGAGCAGG GCCGGGCCGA GGAAGAGGCG GCGCTGACGC TGGGCGCCTC GGGCTGGCGC
GCCTTCCTGA CCGTGACGCT GCCCAATATC AAATGGGCGC TGCTTTACGG CGTGCTGCTG
TGCAACGCCC GCGCCATGGG CGAGTTCGGC GCCGTGGCCG TGGTCTCGGG CAAGATCCGC
GGCCAGACAG CCACCATGCC GATCACCATC GAGATGCTCT ACAACGAATA TCTCTCGGTC
GCCGCCTTCA GCCTGGCCGC GGTGCTGGCA GCTTTGGGGC TGCTGACGCT TGCGCTCAAG
ACCCTGCTGG AATGGCGCCA TGCCGACCAG CTTGCCGCCG GTCGCCGGCA CTGA
 
Protein sequence
MFDDALHPTP ATAGRPAKWR PATEESRLTR ILLIAAALGG LAILVVAPLA VVFAEALARG 
AAQAVTSLTR PEATSAIRLT LIVAAISVPV NAVFGIAAAW TITKFDFRGK AFLITLIDLP
FSISPVVAGL ALVLLFGTNS LIGGWLVASG FPIIFALPGI VLASIFVTFP FVARELIPVM
IEQGRAEEEA ALTLGASGWR AFLTVTLPNI KWALLYGVLL CNARAMGEFG AVAVVSGKIR
GQTATMPITI EMLYNEYLSV AAFSLAAVLA ALGLLTLALK TLLEWRHADQ LAAGRRH