| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4335 |
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| Symbol | |
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| ID | 4582885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1515167 |
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| End bp | 1516498 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639771642 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_918095 |
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| Protein GI | 119387040 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.526899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA GGAGTGATCC CGACGGCCTT TATGACCGGG TGCCGCGCTC GGTCAGGACG
CATCTGGTCT TTGGCCTTGC CCTGCTGGTC CTGTCCCTGG GCGGGTTCGG CAGCTGGGCC
TTTCGGGCGC CGCTTGCGGC GGCGGTGATG GCGCCGGGCA GTTTCGTGGC GACCGGCCGC
AACAAGATCG TCCAGCACCT GGAGGGCGGC ATCATCCGCG AGATCCTGGT CGATGAGGGC
GACGCGGTGA CGGCGGGCCA GGTGCTGGTC CAGCTGGACC GCACCGCCGC CATCGCCAAC
CGACGCGAGC TGGAGTTGCG CCGCGCCCGG CTGGAGGCGA TCAGCGCCCG GTTGCGGGCC
GAATATGCGG GGGTCGAGAC GCTGGCCTTC GGCGCCTTCC TGCAAGAGCA CGAGGACGAG
CCCAGCTTTG CCGCCATCAT GGCCGAGCAG CAGGCCGCCT TTCGCGCCGC CCGCGCCAAG
CTGGACGGCG AGGTCATCCT GCTGCAAAGC AATATCGCCG CCAGCCGCTC CCGCATCGAG
GGCTACGAGG GGCAGCTTGC CGCCGTCGAA ACCCAGCTTG CCCTGCTGCG CGAGGATCAC
GGCGCCCGCG ACACGCTGCT TCAGCGCGGG CTGGTGCGGC GCAGCGACGT CAACATGCTG
GCGCGCGCCA TCGCCGATGC CGAGGGCGAG GCCGGCCGCA TAAGATCGCT GATCGCCGAA
ACCGAAGAGG CCGTGCGCAA GGCCGAAAGC GAGATCGAGC AGGTCCTGAC CCAGCACAGG
CAGACCGCGC TGGACGAAGG CCAGGGCATC GAGGCCGAGC TGGACAGCGT GCGCGAGCAG
TCGCTGAAGG CGCAGGACGT GCTGGAGCGC GCCTATATCA CCTCGCCCGT GGCGGGCACC
ATCGTGCGCA TGCATTACCA CACGCCCGGC GGCGTGATCG AGGCGGGCAA GCCGATCCTT
GAAATCCTGC CGCTGGATGC GCCGCTGATC ATCGAGACCC ATGTCGCGCG CACCGATATC
GACGAGATCG AGATCGGCCA GAAGGCGTCG GTGCGGCTGA CCTCGCTGAA CCAGCGCACG
ACGCCGGTGC TTCAGGGGCA TCTGGTCTAT GTCTCGGCCG ATGCGCTGAC GACGGAAACC
GACGGCATCG CGCGCGAGGT CTATGTGGTT CGGATCGACC TGCCGGCTGC GGAACTGGAG
CGGGTCCACG GCTTCAGGCC GACGCCGGGG ATGCCGGCGG AGGTGATGAT CGAGACCTCC
GCCAGAACCT TTGCGCAATA CCTGATCAAG CCGATCGAGG ACAGCCTCTC GCGCGCCTTC
CGCGAGAACT AG
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| Protein sequence | MTSRSDPDGL YDRVPRSVRT HLVFGLALLV LSLGGFGSWA FRAPLAAAVM APGSFVATGR
NKIVQHLEGG IIREILVDEG DAVTAGQVLV QLDRTAAIAN RRELELRRAR LEAISARLRA
EYAGVETLAF GAFLQEHEDE PSFAAIMAEQ QAAFRAARAK LDGEVILLQS NIAASRSRIE
GYEGQLAAVE TQLALLREDH GARDTLLQRG LVRRSDVNML ARAIADAEGE AGRIRSLIAE
TEEAVRKAES EIEQVLTQHR QTALDEGQGI EAELDSVREQ SLKAQDVLER AYITSPVAGT
IVRMHYHTPG GVIEAGKPIL EILPLDAPLI IETHVARTDI DEIEIGQKAS VRLTSLNQRT
TPVLQGHLVY VSADALTTET DGIAREVYVV RIDLPAAELE RVHGFRPTPG MPAEVMIETS
ARTFAQYLIK PIEDSLSRAF REN
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