| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4329 |
|---|
| Symbol | |
|---|
| ID | 4582879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1509273 |
|---|
| End bp | 1510463 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639771636 |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstC |
|---|
| Protein accession | YP_918089 |
|---|
| Protein GI | 119387034 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0573] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA
[TIGR02138] phosphate ABC transporter, permease protein PstC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0107359 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTCT CATGGACCTT GCTGCTCGTC CTTGCCCTTG CCGGCGCGGG CTATTTCGTC
ACCCGCGCGC GCGTCGTCGC GCTGGCCGGG GGCGACGTGC GGCGGCTGCA TTCGCGGCCC
AGCTATCACG GCTGGAACGC GGCGCTGCTG ACGGCGCTGC CGGCGCTGTT CCTGATCGCC
ATCTGGCGCT TTGTGCAACC GGCCGCGAAT GCGACGCCCG TCGCGATCCT GGCGCTGGTC
CTGGCCGCTG CCGGGCTTGG CTTCGCGCTT GTCCGCAGCG CGCCGGGCTT CCGGGCCCGC
AATGCGGTCG AAAGCATGGT CAAGGGCCTG CTGATCCTGT GTTCCAGCAT CGCCATCCTG
ACCACCGCCG GGATCGTCTT TTCGATGCTG TTCGAATCGG GGCATTTCTT CCGGCAGTAT
CCCTGGCATG ACTTCTTCTT CGGCACCACA TGGTCGCCGC GCTTCGGCGG CGGCTCGCAG
CTGGGCATCC TGCCGCTGCT GTGGGGCACG CTCTACATCT CGCTGATCGC GCTGGCGGTT
TCGGTGCCGA TCGGGCTGTT CGCGGCGATC TACATGTCCG AATACGCCTC GCCCCGGCTG
CGCGGGGTCG CCAAGCCGAT GATCGAGGTG CTGGCCGGCA TCCCGACCAT CGTCTACGGC
CTTTTCGCGC TGATCACCGT GGGCCCGATG CTGCGCGACT ATTTCGCCCA GCCGCTGGGC
CTGGGCAATT CCGGCTCGTC GGTGATGACG GCGGGGCTGG TCATGGGCAT CATGCTGATC
CCCTTCGTCA GCTCGCTTTC AGACGACATC ATTAACGCGG TGCCGCAATC CTTGCGCGAC
GGCGCGCTGG GGCTTGGCTC GACGCAATCG GAAACCGTGC GCAAGGTGGT GCTGCCCGCC
GCCCTGCCGG GCATCGTGGG CGCCGTCCTG CTGGCCGCCT CGCGCGCCAT CGGTGAGACG
ATGATCGTCG TCCTGGGCGC GGGCGCCGCC GCCCGCATGG ACCTGAACCC GTTCGAGGCG
ATGACCACGA TCACCGTCAA GATCGTCAGC CAGCTGACCG GCGACAACGA CTTCGCCGCA
CCCGAGACGC TGGTCGCCTT CGCGCTTGGC CTGACCCTGT TCGTCATCAC GCTGGGGCTG
AACATCGTCG CCCTCTACGT CGTGCGCAAA TACCGGGAGC AATACGAATG A
|
|---|
| Protein sequence | MPVSWTLLLV LALAGAGYFV TRARVVALAG GDVRRLHSRP SYHGWNAALL TALPALFLIA
IWRFVQPAAN ATPVAILALV LAAAGLGFAL VRSAPGFRAR NAVESMVKGL LILCSSIAIL
TTAGIVFSML FESGHFFRQY PWHDFFFGTT WSPRFGGGSQ LGILPLLWGT LYISLIALAV
SVPIGLFAAI YMSEYASPRL RGVAKPMIEV LAGIPTIVYG LFALITVGPM LRDYFAQPLG
LGNSGSSVMT AGLVMGIMLI PFVSSLSDDI INAVPQSLRD GALGLGSTQS ETVRKVVLPA
ALPGIVGAVL LAASRAIGET MIVVLGAGAA ARMDLNPFEA MTTITVKIVS QLTGDNDFAA
PETLVAFALG LTLFVITLGL NIVALYVVRK YREQYE
|
|---|
| |