Gene Pden_4309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4309 
Symbol 
ID4582859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1488263 
End bp1489765 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content66% 
IMG OID639771616 
ProductAcetyl-CoA hydrolase 
Protein accessionYP_918069 
Protein GI119387014 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID[TIGR03458] succinate CoA transferases 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA ATTACCTTCA CCGCATCCGC CACAAGGCTC TGCGCGAGCG CGTGGTCGGT 
GCCGATCAGG CCGCAAGCCT GATCCGCGAC GGCATGGTGC TGGGCATGAG CGGCTTTACC
CGCGCCGGCG AGGCCAAGGC CGTGCCCATG GCGCTCGCCG AGCGCGCCAA GGCCGCGCCG
CTGAAGGTCA CGCTGATGAC CGGGGCGTCG CTGGGCAACG ATCTGGACAA GACGCTGGCC
GAGGCCAAGG TGCTGTCGCG CCGCATCCCC TTCATGTCCG ACCCGGCGCT GCGTCGGGCG
ATCAACGCGG GCGAGGTGAT GTATATCGAC CAGCACCTGT CCGAGACGGT CGAGCAGTTG
CGCACCTGCC AGTTGCCGCC GGTGGACATT GCCATCATCG AGGCGGTGGC GATCACCGAG
ACCGGGGGCA TCGTCCCCAC CACCTCGGTC GGCAATTCCG CCAGCTTCGC GCTTCTGGCC
GAGAAGGTGA TCGTCGAGAT CAACCTGAGC CAGCCAGAGG CGCTGGAGGG GCTGCACGAC
ATCTATATCC CGACCTACCG TCCGACCCGC ACGCCGATCC CGGTGGTGAC GCCGGAAAGC
CGCGTCGGCT TTCCCTTCAT CCCGGTGCCG CCCGAGCGCA TCGCGGCCAT CGTGATCTCG
ACCAAGCTCG ACTCGTCCTC GACCATCCAC GACCCGGATG CCGAGACCCG CGCCATCGCC
GGCCACCTGA CCGAATTCCT GAAGCACGAG GTCGCGCAGT CCCGCCTGCC CAGCCACCTG
CACCCGCTGC AGGCCGGCAT CGGCACCATT GCGAACGCGG TGCTGCACGG CTTTGTCGAC
AGCCCGTTCC ACGACCTGAC CATGTATAGC GAGGTCTTGC AGGATTCGAC CTTCGACCTG
ATGGATGCGG GCAAGATGGT CTTTGCCTCG GGCTCCTCGA TCACGCTTTC GGCGCCGAAA
TACCGCGACG TGATGGCGCG CTTTGCCGAG TTCAAGCCCA AGCTGGTGCT GCGCCCGCAA
GAGATTTCCA ACCACCCCGA GGTGGTGCGG CGGCTGGGGC TGATCTGCAT CAACACGGCG
CTGGAATTCG ACCTTTACGG CAACGTGAAC TCGACCCATG TCATGGGCAC GCAGATGATG
AACGGCATCG GCGGCTCGGG CGATTTCGCG CGCAACGCCT ATCTGTCGGT CTTCGTCACC
AAGTCCATGG CCAAGGACGG GCGGATTTCC TCGGTGGTGC CGATGGTCAG CCATGTCGAT
CATACCGAGC ACGACGTGGA CATCCTGGTC ACCGAGCAGG GGCTGGCGGA CCTGCGCGGC
CTGTCCCCGC GCGAGCGGGC GCAGGTGGTC TTGCGAAACT GCGTGGCGCC GGAATGGCGC
GACGCGCTGG AGGACTACCA TGGCCGGGCG CTGGCACGGG GCGGGCATAC GCCGCACCTG
ATCGAGGAGG CGCTGAGCTG GCACGACCGC CTGCGCCGCG GCGGCAGCAT GAAGCCGGAA
TGA
 
Protein sequence
MTENYLHRIR HKALRERVVG ADQAASLIRD GMVLGMSGFT RAGEAKAVPM ALAERAKAAP 
LKVTLMTGAS LGNDLDKTLA EAKVLSRRIP FMSDPALRRA INAGEVMYID QHLSETVEQL
RTCQLPPVDI AIIEAVAITE TGGIVPTTSV GNSASFALLA EKVIVEINLS QPEALEGLHD
IYIPTYRPTR TPIPVVTPES RVGFPFIPVP PERIAAIVIS TKLDSSSTIH DPDAETRAIA
GHLTEFLKHE VAQSRLPSHL HPLQAGIGTI ANAVLHGFVD SPFHDLTMYS EVLQDSTFDL
MDAGKMVFAS GSSITLSAPK YRDVMARFAE FKPKLVLRPQ EISNHPEVVR RLGLICINTA
LEFDLYGNVN STHVMGTQMM NGIGGSGDFA RNAYLSVFVT KSMAKDGRIS SVVPMVSHVD
HTEHDVDILV TEQGLADLRG LSPRERAQVV LRNCVAPEWR DALEDYHGRA LARGGHTPHL
IEEALSWHDR LRRGGSMKPE