Gene Pden_4297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4297 
Symbol 
ID4582847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1475351 
End bp1476316 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content65% 
IMG OID639771604 
Productputative GTP cyclohydrolase 
Protein accessionYP_918057 
Protein GI119387002 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.872356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGG CCCGCCCCGT CGCCACCGAA CGCGCCTATC CGGCGCTGAG CCGCGAATAT 
CCGGCAGATT TCCGCGTGGA CGACAGCTAC AAGGCCAGCC TGCCCGACCT TCAGAACGGG
CCGGCCAGCC TGATCGTCGG TGCGCGGGCC CCGATCCAGC ATGTCGGCAT CTCGAATTTC
CGCCTGCCGA TCCGCTACCA GACGCAGGAG GGCGGCGAGA TCGCGCTGGA GACCAGCGTC
ACCGGCACGG TCAGCCTGGA GGCCGACCGC AAGGGCATCA ACATGAGCCG CATCATGCGC
TCGTTCTATG CCCATGCGGA AAAGCAGTTC TCGATGGGCG TGCTGGAGGC GGCGCTGGAG
GATTACAAAT CCGACCTGGG CAGCTTCGAT GCCCGCATCA TGATGCGGCT CAGCTATCCG
ATGCGGGTCG AATCGCTGCG TTCGGGCCTG TCCGGCTGGC AATATTACGA CATCGCGCTG
GAGCTTTCCG AGCGGGCCGG CCAGCGGCTG CGGATCATGC ATTTCGATTA CGTGTATTCC
TCGACCTGCC CCTGTTCGCT GGAACTGGCC GAGCACGCCC GGCAGATGCG CGGGCAACTG
GCCACGCCGC ATTCGCAGCG CAGCATCGCG CGGATCTCGG TGGTGATGCA GGGCGATACG
CTGTGGTTCG AGGACATGGT AACGCTGTGC CGCCGGGCGG TGGCGACCGA AACCCAGGTC
ATGGTCAAGC GCGAGGACGA GCAGGCCTTT GCCGAGCTGA ACGCCGCCAA TCCGATCTTC
GTCGAGGATG CGGTGCGCGC CTTCGCCGCC GAACTGATGG CCGAGCCGCG CATCGGCGAT
TTCCGCGTCG TCGCCAGCCA TCAGGAATCG CTGCATTCGC ATGATGCGGT TTCGGTGCTG
ACCCAGGGCG AGACCTTCGC CCATGCCAGC CTTGATCCCG CGATCTTCGC CGGCCTCAGG
GCGTGA
 
Protein sequence
MTEARPVATE RAYPALSREY PADFRVDDSY KASLPDLQNG PASLIVGARA PIQHVGISNF 
RLPIRYQTQE GGEIALETSV TGTVSLEADR KGINMSRIMR SFYAHAEKQF SMGVLEAALE
DYKSDLGSFD ARIMMRLSYP MRVESLRSGL SGWQYYDIAL ELSERAGQRL RIMHFDYVYS
STCPCSLELA EHARQMRGQL ATPHSQRSIA RISVVMQGDT LWFEDMVTLC RRAVATETQV
MVKREDEQAF AELNAANPIF VEDAVRAFAA ELMAEPRIGD FRVVASHQES LHSHDAVSVL
TQGETFAHAS LDPAIFAGLR A