Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4295 |
Symbol | |
ID | 4582845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1472593 |
End bp | 1474992 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639771602 |
Product | UvrD/REP helicase |
Protein accession | YP_918055 |
Protein GI | 119387000 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATT TCGACGACTC GGACGCCTTC GAGGCCGCAG CCGCCCCGGT TCCGCTTTCC CAGCGTGCCA TGGGCGCACG GCCGACGCCC TATCTGGATG GGTTGAACCC GGCGCAACGC GCGGCCGTCG AGGCGCTGGA CGGGCCGGTC CTGCTGCTTG CGGGTGCCGG CACCGGCAAG ACCCGCGCCC TGACCACGCG CATCGCGCAC CTGCTGAACC TGGGCCTCGC CCGGCCCGGG CAGATCCTGG CCGTGACCTT TACCAACAAG GCCGCGCGCG AGATGAAGGA CCGCATCGGC CGGCTCTTGG GCGAGATGGT CGAGGGCATG CCCTGGCTTG GCACCTTCCA CTCGATCAGC GTCAAGATCC TGCGCCGCCA TGCCGAACTC ATCGGCGATG GCGAGCTGCA CCTGAAGCCC AGCTTCACCA TCCTGGACAC CGACGACCAG ATCCGGCTGC TCAAGCAGCT GATCCAGGCC GAGAATATCG ACGAGAAGCG CTGGCCGGCG CGGCAACTCG CGCATCTGAT CGACGGCTGG AAGAACCGCT GCTTGTCCCC GGCCAAGCTG CCCAAGGGCG AGGAACGCGC TTTCGACGGT TGGGGCGGGC GGCTTTACGC CGCCTATCAG CGCCGGCTGC TGGAACTGAA CGCGGTCGAT TTCGGCGACC TGCTGATGCA TTGCGTCAAC CTGTTCCAGG CGCATCCCGA CGTGCTGCGG ACTTGGCAGG ACCGTTTCCG CTATATCCTG GTGGACGAGT ATCAGGACAC CAACGTCGCG CAATACATGT GGCTGCGGCT GTTGGCGCAG GCGCATCGCA ACATCTGCTG CGTGGGCGAC GACGACCAGT CGATCTATGG CTGGCGCGGC GCCGAGGTCG GCAACATCCT GCGGTTTGAA AGCGATTTCC CCGGCGCGCA GGTGATCCGG TTGGAGCAGA ACTATCGCTC GACCCCGCAT ATCCTTGCCG CCGCCTCGGG GCTGATCGCG GCGAACAAGG GGCGGCTGGG CAAGACGCTG TGGACCGAGG CCGAAGAAGG GGAGCGCGTG CGCCTGATCG GCCATTGGGA CAGCGAGGCC GAGGCGCGCT GGATCGGCGA GGAGATCGAG GCGTTCCAAG GCGGTCATCG CCACTCCATC GGCCGGCGCA GCCTGAACGA CATTGCCATC CTCGTGCGCG CCAGCCACCA GATGCGGGCC TTCGAGGACC GCTTCATGAC CATCGGCCTG CCTTACCGGG TGATCGGCGG CCCGCGCTTC TACGAGCGGC AGGAAATCCG CGACGCCATG GCCTATTTCC GGCTGGCGGT CAGCCCCACC GACGACCTGG CCTTCGAGCG TATCGTGAAC GTGCCCAAGC GCGGCCTGGG CGACAAGGCG GTGCAGAAGA TCCAGGTCGA GGCGCGGGAA CGCGGGCTGT CGCTTCTGGA GGGCGCGGCC TCGGCCGTGG CCAGCGGCGC GCTTGGCGGC AAGGGGGCGG GGGCGCTGCG GCAGTTCACC GAGGCCATGG GCCGCTGGCA TGCCGATGCG CTGGACAGTC GCATGAACCA TGTCGAGCTG GCCGAGCGGA TCCTGGACGA ATCCGGCTAT ACCGCCATGT GGCAGAACGA CAAGTCGCCC GACGCGCCGG GGCGGCTCGA CAACTTGAAA GAATTGATAA AGGCGCTGGA AGAATTTGAA AACCTTCAAG GTTTCCTCGA GCATGTCGCG CTGGTCATGG ACAATGACAG GGGCGAGCAG TCCGAGGAGG TCTCGATCAT GACGCTGCAT GCCGCCAAGG GGCTGGAATA TCCCATCGTC TTCCTGCCGG GCTGGGAGGA TGGGCTGTTC CCCAGCCAGC GCAGCATGGA CGAAAGCGGC ATGAAAGGGT TGGAAGAAGA GCGGCGCCTG GCCTATGTCG GCATCACGCG CGGCGAGGAA CTGGTGACGA TCAGCTTTGC CGGCAACCGC CGCATGTATG GGCAATGGCA ATCGTCGCTG CCTTCGCGCT TCATCGACGA ACTGCCCGAG GATCATGTCG AGGTGTTGAC CCCGCCGGGC CTTTACGGCG GCGGCTATGG CGCGGCGGTC CAGCCCTTTG CGCAATCGGT CATGCATGAA CGCGCGGCGC GGGCGGATGT CTATAACTCG CCGGGCTGGA AGCGGATGCA GGAACGGTCC GCCCAGCGTG CGCAGCCCGT CCACCGCACG CCGGTCGTCA TCGATGCCGA GCCGGCGGCG CGATTTTCGG TCGGCGACCG GGTGTTCCAC CAGAAATTCG GCAACGGCAC CGTCATGGGC ATCGCCGAGG ATACGCTGAC CGTCGAATTC CCGACCGGCT TCAAGACCAT CAAGGCGGGC TATGTGCAGC CCGCCTCGCA GGCCGGTGGG GCCGGCTCGC TGGACGACGT GCCGTTCTAG
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Protein sequence | MSNFDDSDAF EAAAAPVPLS QRAMGARPTP YLDGLNPAQR AAVEALDGPV LLLAGAGTGK TRALTTRIAH LLNLGLARPG QILAVTFTNK AAREMKDRIG RLLGEMVEGM PWLGTFHSIS VKILRRHAEL IGDGELHLKP SFTILDTDDQ IRLLKQLIQA ENIDEKRWPA RQLAHLIDGW KNRCLSPAKL PKGEERAFDG WGGRLYAAYQ RRLLELNAVD FGDLLMHCVN LFQAHPDVLR TWQDRFRYIL VDEYQDTNVA QYMWLRLLAQ AHRNICCVGD DDQSIYGWRG AEVGNILRFE SDFPGAQVIR LEQNYRSTPH ILAAASGLIA ANKGRLGKTL WTEAEEGERV RLIGHWDSEA EARWIGEEIE AFQGGHRHSI GRRSLNDIAI LVRASHQMRA FEDRFMTIGL PYRVIGGPRF YERQEIRDAM AYFRLAVSPT DDLAFERIVN VPKRGLGDKA VQKIQVEARE RGLSLLEGAA SAVASGALGG KGAGALRQFT EAMGRWHADA LDSRMNHVEL AERILDESGY TAMWQNDKSP DAPGRLDNLK ELIKALEEFE NLQGFLEHVA LVMDNDRGEQ SEEVSIMTLH AAKGLEYPIV FLPGWEDGLF PSQRSMDESG MKGLEEERRL AYVGITRGEE LVTISFAGNR RMYGQWQSSL PSRFIDELPE DHVEVLTPPG LYGGGYGAAV QPFAQSVMHE RAARADVYNS PGWKRMQERS AQRAQPVHRT PVVIDAEPAA RFSVGDRVFH QKFGNGTVMG IAEDTLTVEF PTGFKTIKAG YVQPASQAGG AGSLDDVPF
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