Gene Pden_4294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4294 
Symbol 
ID4582844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1471754 
End bp1472596 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content71% 
IMG OID639771601 
ProductNmrA family protein 
Protein accessionYP_918054 
Protein GI119386999 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCG CCGTCACCGG AGCCACCGGC CAGCTTGGCC GCCTGACCAT CGCCCGGCTG 
AAAACCCTGC TGCCCGCAGG CGAAATCGTC GCGCTGGCCC GCAATCCCGA AAAGGCCGCC
GACCTGGGCG TCGAGGCCCG CGCCTTCGAC TACGACCGGC CCGAAACGCT GGCCACCGCC
CTGCAGGGCG TGGACCGGCT GCTGCTGATC TCGTCGAGCG AGGTCGGCAA GCGCGCCGCC
CAGCATCGCG CCGTGATCGA GGCTGCCAAG GCCGCCGGTG TCGGGCAGAT CGTCTATACC
AGCCTGCTGC ATGCCGACCG CTCGCCGCTG TCGCTGGCCG AGGAACATGT GGCGACCGAG
GCCATGCTGG CCGCATCGGG CATTCCCCAC GCCATCCTGC GCAATGGCTG GTATGCCGAG
AACCATACCG GCGCGATCCC TGCGGCACTG GCGCATGGCG CGCTGATCGG CGCGGCGGGC
GAGGGTCGGA TCTCGGCCGC CGCGCGCGCG GATTACGCCA AGGCGGCTGC ATCGGTGCTG
GCGGATGGTG GCCATGCCGG CCAGACCTAT GAACTGGCCG GCGATGACGG CTGGACCCTG
GCCGAGCTTG CCGCCGAGCT TTCGGCGCAA AGCGGCAAGG CGATCCCCTA TCGCAACCTG
TCGCAACAGG ATTACGCGGC TGCGCTGACG GGCGCGGGCC TGCCCGAGGG GCTGGCCGGG
GCGATCGCAA GCTGGGATAC GGGTGCCGCG CAAGGCGCGC TGTTCGACGA CAGCCGCACG
CTGTCGCGCC TGATCGGCCG TCCGACCGCG ACCCTGGCCG AAGTGGTGCG CGCCGCGCTC
TAG
 
Protein sequence
MTVAVTGATG QLGRLTIARL KTLLPAGEIV ALARNPEKAA DLGVEARAFD YDRPETLATA 
LQGVDRLLLI SSSEVGKRAA QHRAVIEAAK AAGVGQIVYT SLLHADRSPL SLAEEHVATE
AMLAASGIPH AILRNGWYAE NHTGAIPAAL AHGALIGAAG EGRISAAARA DYAKAAASVL
ADGGHAGQTY ELAGDDGWTL AELAAELSAQ SGKAIPYRNL SQQDYAAALT GAGLPEGLAG
AIASWDTGAA QGALFDDSRT LSRLIGRPTA TLAEVVRAAL