| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4293 |
|---|
| Symbol | |
|---|
| ID | 4582843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1471303 |
|---|
| End bp | 1471668 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639771600 |
|---|
| Product | HxlR family transcriptional regulator |
|---|
| Protein accession | YP_918053 |
|---|
| Protein GI | 119386998 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT CCGATGCCGC CGGCAGGGGC GATCTGATGG CGGCGGAATG CCCCTCGCGC
GATGTGCTGC GGCGGCTGAC CGGGCGCTGG GGCATGCTGG TGCTGCGCGT GCTGGCCGAG
GGGCCGCACC GCTTTTCCGC GTTGCGCAAG CGCATCGGCG GCGTCAGCGA GCGGATGCTG
GCGCAGACGC TTCAGGGGTT GGAGGCGGAC GGCATGGTGC TGCGCCGCGA TTTCCAGACC
GTGCCGCCGC ATGTGGAATA TGCGCTGACG CCGCTGGGGC ACGAGGCGGC GCTGCGGGTC
GGCGCGCTGT TGGGCTGGAT CGAGGATGCG CTGCCCCAGA TCGCGCGCGG CTGGACGCGG
GCCTGA
|
|---|
| Protein sequence | MKKSDAAGRG DLMAAECPSR DVLRRLTGRW GMLVLRVLAE GPHRFSALRK RIGGVSERML
AQTLQGLEAD GMVLRRDFQT VPPHVEYALT PLGHEAALRV GALLGWIEDA LPQIARGWTR
A
|
|---|
| |