| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4291 |
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| Symbol | |
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| ID | 4582841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1467191 |
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| End bp | 1470424 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639771598 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_918051 |
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| Protein GI | 119386996 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.271094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACC ATCATGCCCG CCCCGAGATC CTGCTGCCCC CGGTCGAGCA CCCGAACCCG
CCCGCGGATT ACGTCGAACT GGCGGTGACC AGCGCCTTCA GCTTCCTGCA CGGCGCCTCG
CATCCGCGCG AACTGGCGCT GGCGGCGCAT CTCATGGGCT ATGACGCGCT GGGAATCGCC
GACCTCAACA GCCTCGCCGG CGTGGTGCGG CTGCATGCCA CGGCGAAGAA GCTGCACCTG
CGCCCGGTGA TCGGGGCGCG GATCGTGCTG GCGGACGGCA CCGCTTTCCT GGCCTATCCG
ACCGACCGCG CCGCCTATGG CCGGCTCGCC TCGCTCATCA CCAAGGGGCG GCGGCACGAT
CTGGCCGGGA ACTGGCAGAA AAAGGGGCGC TGCGACCTGA ACCTTGCCGA CCTAGCCACC
CATGCGCAGG GGATGCGGCT GATCTGGCTG CCGGGCGACG ACCTTTCGCC CCTGCCCGAT
CTGGCCCTGC GCCTGCCGCA GCTGTCGCAT GTCGCGGCCA GCTGGCTTTA TCGCGGTGAC
GACCGGGCGC GGATCAACCG GCTGGACCGG GCGGCGCAGG CGGCGGGGCT CTCCATCGTC
GCCGTCAACG ACGTGCATTA CCACGCGCCC GACCGCCGCC CGTTGCAAGA CGTGATGACC
TGCATCCGCG AGGGCACCAC CATCGCCCGG GCCGGCCTGC TGCTGGCGCA GAACGCCGAG
CGCCACCTGA AGCCGCCGGC CGAGATGGTG CGCCTGTTCG CCGACTGGCC CCATGCCATC
CGCGCCACGC GCGAGATCGC CGACAGTTGC CGCTTCTCGC TGGACGAGCT GCAATACGAA
TACCCGCGCG AAAGCGTGCC GCCCGGCCTG ACGCCGCAGC AGCATCTGGA AAACCTGACC
TGGCAAGGCG CGGACTGGCG CTATCCTGCC GGTGTGCCCG ACAAGGTCCG CGCCACGCTG
ATCAAGGAAC TGGCATTGAT CCGCGAGAAG AAGATCGCGC AATATTTCCT GACCATCCAC
GACATCGTCC GTTTCGCCGA AGACCGGGCG ATCCTGCACC AGGGCCGCGG CTCGGCGGCG
AATTCCGCGG TCTGCTACGT GCTGGGCATT ACCCCGGTCG ATCCCGCCAA GCATGAATTG
CTGTTCGAGC GGTTCATCAG CCAGAACCGC AAGGAGCCCC CCGATATCGA CGTGGATTTC
GAGCATGAGC GGCGCGAGGA GGTGATCCAG CACATCTACG ACCGCTACCG CCGCGACCGC
GCCGGGCTTT GCGCCACGGT GATCCACTAT CGCCCGCGCA GCGCCATCCG CGAGGTCGGC
AAGGTCATGG GCCTGTCCGA GGACGTGACC TCGGCCCTGG CCGATACGGT CTGGGGCAGT
TGGGGCAAGG ACATGTCCGC CGCCGACACC ATGCAGGCGG GGCTCGACCT GGGCGACCCG
CTGCTGCGAC GCACGGTCAG GCTGGCCGAA GAGATGATCG GCATGCCCCG CCACCTGTCG
CAGCATGTCG GCGGCTTCGT GCTGACCGAG GGGCCGCTGT CCGAAACCGT GCCCATCGGC
AATGCCGCCA TGCCGGATCG CAGCTTCATC GAATGGGACA AGGACGACAT CGACGAATTG
CACATCCTCA AGGTCGATGT GCTGGCGCTG GGGATGCTGA CCTGCATCCG CAAATGCTTT
GCGCTGATCA AGGCGCATTA CGGCAAGGTG CTGACGCTTT CGGATTTCGA CCATGACGAC
CAGCCGACCT ACAAGATGCT GCAAAGGGGT GACAGCATCG GCACCTTCCA GGTCGAAAGC
CGGGCGCAGA TGGCCATGCT GCCGCGCCTG AAGCCCAAGA GGTTCTACGA CCTGGTGATC
CAGGTCGCCA TCGTCCGCCC CGGCCCGATC CAGGGCAACA TGGTCCATCC TTATCTGCGG
CGTCGAGCGG GGTTGGAGAC GGTCGATTTC CCCGGTCCCA GGGATGGCGA CCCGGACGAG
TTGAAGAATA TCCTGTTTCG CACCGAAGGC GTGCCGATCT TTCAGGAGCA GGCGATGAAG
ATCGCCATGG TCGCCGCCGA GTTCACTCCG AACGAGGTGG ACGATCTGCG CAAGGCCATG
GCCACCTTCC GCTCGCGCGG GACGATCGGG CAGTTGCAGG ACAGGATGGT CGGCAAGATG
GTCGAGCGCG GCTACACGCG CGACTTCGCC GAGCGTTGCT TCAACCAGAT CAAGGGCTTC
GGCGATTACG GCTTTCCCGA AAGCCATGCG GCGGCATTCG CACATCTGGC CTATGTCTCG
GCCTGGCTGA AATGCCATCA CCCGGCCGCC TTCGCGGCGG CGCTGCTGAA CAGCCAGCCG
ATGGGTTTCT ACGCCCCGGC CCAGATCGTG CGCGACGCGC GCGACCACGG CGTCACCGTG
CTGCCGGCCG ATGTGAACAT CAGCGAATGG GACAATACGC TGGAGCCTTG CGACGGCACC
TTCGCGCTGC GCCTCGGCCT GCGCCAGATC GACGGGCTGC CCGAGGCGCT GGCCGAACGC
ATCAAGCAGG CGCGCCACGA ACCCTATGCC GACCTGGCCG ACCTCAAGAC CCGCGCCGGG
CTCGATGCCC GGGCCATCCG GCTGATCGCG GCGGCCGATG GCTTGCGCTC GATGGGGCTC
GACCGGCGGG CGGGGCTCTG GCAGGCGCGC GCCCTGCGCG ATGCGCCGGA ACTGCCGCTG
TTCGGACGAC GGGACGAAGG GCCCGAGCCC GCCGTCACCC TGCCCGCCAT GCCGCTATAC
GAGCATGTCA CCGCCGATTA TCAGACCTTG CGTCTGTCGC TGAAGGCCCA TCCGATGCGC
TTTCTGCGCC GCAGCCTGAC GGCGCAGGGC TATGTCCCGG CGGCCGGCCT TGCCGCCCTG
TCGAACCGCA GCCGCCTGCG CATGGCCGGC ATCGTGCTGG TCCGCCAGCG CCCTGGCAGC
GCCAACGGCA CCTGCTTCGT CACGCTGGAG GACGAGACCG GCGTGGCGAA TCTGGTGGTC
TGGGAAAAGA CCTTCGCGCA GTTCCGCAAG GTGGTGATGA CCGCCCGCCT GCTGGAGGTG
CATGGCCAGC TTCAGCGCGC CGAGGGCGTG ACCCATATCG TCGCGCATTG GCTGGGCGAC
CGATCCGAAG CCTTGCTGCG CCTGGCCGGA GAGGCGCCGG CCGCGCTGCC CCAGCCCCGC
CCCAGCCATC CGCGCCAGGT GCGCATCCTG CCGAAATCGC GGGATTTCCA CTAG
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| Protein sequence | MPDHHARPEI LLPPVEHPNP PADYVELAVT SAFSFLHGAS HPRELALAAH LMGYDALGIA
DLNSLAGVVR LHATAKKLHL RPVIGARIVL ADGTAFLAYP TDRAAYGRLA SLITKGRRHD
LAGNWQKKGR CDLNLADLAT HAQGMRLIWL PGDDLSPLPD LALRLPQLSH VAASWLYRGD
DRARINRLDR AAQAAGLSIV AVNDVHYHAP DRRPLQDVMT CIREGTTIAR AGLLLAQNAE
RHLKPPAEMV RLFADWPHAI RATREIADSC RFSLDELQYE YPRESVPPGL TPQQHLENLT
WQGADWRYPA GVPDKVRATL IKELALIREK KIAQYFLTIH DIVRFAEDRA ILHQGRGSAA
NSAVCYVLGI TPVDPAKHEL LFERFISQNR KEPPDIDVDF EHERREEVIQ HIYDRYRRDR
AGLCATVIHY RPRSAIREVG KVMGLSEDVT SALADTVWGS WGKDMSAADT MQAGLDLGDP
LLRRTVRLAE EMIGMPRHLS QHVGGFVLTE GPLSETVPIG NAAMPDRSFI EWDKDDIDEL
HILKVDVLAL GMLTCIRKCF ALIKAHYGKV LTLSDFDHDD QPTYKMLQRG DSIGTFQVES
RAQMAMLPRL KPKRFYDLVI QVAIVRPGPI QGNMVHPYLR RRAGLETVDF PGPRDGDPDE
LKNILFRTEG VPIFQEQAMK IAMVAAEFTP NEVDDLRKAM ATFRSRGTIG QLQDRMVGKM
VERGYTRDFA ERCFNQIKGF GDYGFPESHA AAFAHLAYVS AWLKCHHPAA FAAALLNSQP
MGFYAPAQIV RDARDHGVTV LPADVNISEW DNTLEPCDGT FALRLGLRQI DGLPEALAER
IKQARHEPYA DLADLKTRAG LDARAIRLIA AADGLRSMGL DRRAGLWQAR ALRDAPELPL
FGRRDEGPEP AVTLPAMPLY EHVTADYQTL RLSLKAHPMR FLRRSLTAQG YVPAAGLAAL
SNRSRLRMAG IVLVRQRPGS ANGTCFVTLE DETGVANLVV WEKTFAQFRK VVMTARLLEV
HGQLQRAEGV THIVAHWLGD RSEALLRLAG EAPAALPQPR PSHPRQVRIL PKSRDFH
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