Gene Pden_4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4290 
Symbol 
ID4582840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1465671 
End bp1467191 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content76% 
IMG OID639771597 
Producthypothetical protein 
Protein accessionYP_918050 
Protein GI119386995 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGC GGCGGATCGT CTCGATTTCT CTGCCCCGCC TCGCGATCGA GAGCTGGCAG 
AGCCGCGCGA CGCGCCGGGG CGACGCATGG CCTGAGGACA TCCCGCTGGC GCTGGCCGCG
CCCGGCCCGC ACGGACCCGT CATCCACGCC GCGAACCGCG CCGCCGAACG GGCCGGCGCC
CGGATCGGCA CCCGCGCCGT GGACAGCCGC GCCATCTGTC CCGCCCTGCA CATCGAGCCG
GCCGAGCCCG AGCGCGACGC CGCCCGGCTG GCGCGGCTGG CCTTCTGGGC GCGGCGCTGG
GGGCCCTACA GCACGCCCGA CGGCGATGAC GGCATCATCC TCGACACCAC CGGCGCCGCG
CATCTTTTCG GCGGCGAGGC GGCGATGCTG GCCGAGATCC AGGCCGGCTT CGCCCGCGCC
GGGCTGACCG CGCGGCTGGC GCTGGCGCCG ACGCGCGGCG CAGCCTGGGC GCTGGCCCGC
TTTGGCCCCG AGCGCGCGAT CTGCACCGAT CCCTTGCCCG CGCTGGCACC GCTGCCGGTG
GCCGGGCTGC GGCTGTCGGG GGAAACCCTG CTGCTCTTGC GCCGGTTGGG GCTCAAGACC
ATCGGCGACC TTGCCGCCAT CCCGCGCCTG TCGTTGATGC GCCGTTTCGC CCGGGCCGAG
CCGCAGGACA ATCCGCTGGT CCGCCTCGAC CAGGCGCTGG GGCGCGCGGC CGAGCCCTTG
GACGCGCCCG AGCCCGCCCC GGAATTCGCC GCCGAGGCCC GGCTGGCCGA GCCGGTGATG
GACCCCTCGG ACTGGCTGCC GGGACTGCTG GCCGATCTTT GCGCCCAGAT GGCGGCGGCG
GATCGCGGCT GCCGGCGGCT GTGCCTGTCG GTCTTTCGCG TCGATGGCGA GCGGCGCGAC
ATCCGCGTCG CCATGGCCGC GCCCACGCGC GACCCCGGCC ACCTGCTGCG CCTGTTCGAC
GGTCGGCTGG AGCGGCTGGA CCCCGGCTAT GGCTTCGACC TGATCCGGCT GGCGGCCGAG
GCGGTCGAGC CGCTGGCCCA GGCCCAGCCC GGCCTGGACG GCGCCGCGCC GACGGGACTG
GCACTGGCGC GGCTGGTGGA CCGGCTGGCG GCACGCTTTG GCGCCCAGAC GATCAGCCGG
CCGCTGCCGC GCGAAAGCCA TGTCCCCGAA CGCGCGGAAG CCCCCGGCCC GCCGCTGGCC
GCCACCCCTG CGCCGCCCGC GCGCCCCGAC CGGCCGATCC GCCTGCTCAA CCCGCCCGAA
GAGATCCGCG TGCTCTACGC CATCCCCGAG GGACCGCCGG CCCAATTCGT CTGGCGCCGC
CAGACCCTGC GCGTCGCCCG CCACGCGGGG CCCGAGCGCA TCGCCCCGGA ATGGTGGCAC
GACCGCCCCG GCACGCGGCT GCGCGACTAT TTCCGCATCG AGGACGACAG CGGCCTGCGC
CTGTGGATCT ATCGCGAGGG GCTGGTTCAT GACGGCCGCG GTGGGGCGCC ACGCTGGTTC
CTGCACGGGA TATTCGCCTG A
 
Protein sequence
MTGRRIVSIS LPRLAIESWQ SRATRRGDAW PEDIPLALAA PGPHGPVIHA ANRAAERAGA 
RIGTRAVDSR AICPALHIEP AEPERDAARL ARLAFWARRW GPYSTPDGDD GIILDTTGAA
HLFGGEAAML AEIQAGFARA GLTARLALAP TRGAAWALAR FGPERAICTD PLPALAPLPV
AGLRLSGETL LLLRRLGLKT IGDLAAIPRL SLMRRFARAE PQDNPLVRLD QALGRAAEPL
DAPEPAPEFA AEARLAEPVM DPSDWLPGLL ADLCAQMAAA DRGCRRLCLS VFRVDGERRD
IRVAMAAPTR DPGHLLRLFD GRLERLDPGY GFDLIRLAAE AVEPLAQAQP GLDGAAPTGL
ALARLVDRLA ARFGAQTISR PLPRESHVPE RAEAPGPPLA ATPAPPARPD RPIRLLNPPE
EIRVLYAIPE GPPAQFVWRR QTLRVARHAG PERIAPEWWH DRPGTRLRDY FRIEDDSGLR
LWIYREGLVH DGRGGAPRWF LHGIFA