| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4287 |
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| Symbol | |
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| ID | 4582837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1462297 |
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| End bp | 1463931 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639771594 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_918047 |
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| Protein GI | 119386992 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.275898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.90981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCGA CCGTTTTTTC AGCACGCCGC ATCATCACCA TGGACCCGTC GCGGCCCGAG
GCGACCCATG TGATGGTGTC CCATGACGGG CGCATCCTCG CCGTCGGCGG CCCCGACATG
ATGCGCGGCC GGGGCGAGTT GCGCCACGAC GACCGTTTCG CCGACAAGAT CCTGATGCCC
GGCTTCGTCG AGGGGCACGC CCATATGATG GAGGGCTCGG TCTGGCGCTT TACCTATCTT
GGCCATTACG ACCGCGTGGC CCCGGACGGG CGACCGTGGC AGGGCATCAC CAGCACCAAT
GCGCTGGTCG AGCGCCTGCG CGAACGCGCC GAGGAACTGG GCGACGGTCC CGTCGTCGGT
TGGGGCTTCG ATCCGCTTTT CGTGCCCGGC GACCGGCTGT CGCGGCTGGA CCTGGACCGG
GTCTCGACCA CGCGGCCGGT GGTGGTGCTG CATTCGAACA TGCACCTGCT GACCGCCAAC
AGCGTGGCGC TGGAACTGGC CGGATACGAC GAGAACACCG ATATCCCGGG CGTCATCCAT
ACCGAGGACG GCGAGCTGCA CGGCGAGTTG CACGAGATGG GCGCCATGTT CCCGGTCATG
CGCCGGGTCG GCGCCAGCTT CCGCGCCCTT GGCGGCGATC CCGAGGCGAT CTGGAACTTC
GCGCGTTCGG CCTGCCGGGC GGGGGTGACG ACCTCGACCG ACCTGCTGAA CGAGCTGGCC
GACGAGACGC TGGCCGACCT GTTCGCCACC ACGGCCAAGG ACGGCTATCC GCTGCGGCTG
GTGCCGATGC TTTCGGCGAT GGCGCTGCCG CCCGCGGCGG TGGCGGCGCG GGCGCAGGAG
TTGCGGGCGC GCTCGACCGA CCGGCTGCGG CTGGGCGGGG TGAAGATCGT CACCGACGGC
TCGATCCAGG GCTTCACCGC ACAACTGAAC GCGCCCGGCT ATCATCGCGG CACCGACAAC
GGCATCTGGA ACATCGCCCC CGAGGCGCTG AACGCCATGG TGGACGACCT GAACCGCCAG
GGCATCCAGA TGCATATCCA TGTCAACGGC GACGGCGCCA GCCTTGCCGC CATCGAGGCG
CTGGAGGCGG CGCTGTCCGG GCATTTCCGC CCCGACCACC GCCACACGTT GCAGCATTGC
CAGATGGCCG ACCGCGCCCA GCTGCGCCGC ATCGCCGCGC TGCAATGCTG CGTCAACCTG
TTCGCCAACC ACCTGTATTA CTTCGGCGAC AAGCATTACG AGATCACCAT CGGCCCCGAG
CGCGCCTGCC GCATGAACCC CTGCGCCAGC GCGCTGGAGA TGGGCATTCC GCTGGCCATC
CATTCCGACG CGCCGATCAC GCCGCTGGCA CCGCTGGTCA CCGCCTGGTG CGCGGTCAAC
CGCCTGACCG ACAGCGGCCG GCAGTTGGGC ACCTCCGAGC GCATTTCGCT GGACGCCGCG
CTTTACGCCA TCACGCTGGG CGCGGCCTAT ACGCTGAAGC TCGACGGCGA GCTGGGTTCG
GTCGAGGTCG GCAAGCGCGC CGATTTCGCC GTGCTCGAGG ACGACCCGCA CGCGCTTGGC
CCCGAACGTC TGCGCGAGGC GCGGGTCTGG GGCACCGTCT TCGGCGGCCG GCCGGTCCCG
GCCGGATCGT TCTAA
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| Protein sequence | MIPTVFSARR IITMDPSRPE ATHVMVSHDG RILAVGGPDM MRGRGELRHD DRFADKILMP
GFVEGHAHMM EGSVWRFTYL GHYDRVAPDG RPWQGITSTN ALVERLRERA EELGDGPVVG
WGFDPLFVPG DRLSRLDLDR VSTTRPVVVL HSNMHLLTAN SVALELAGYD ENTDIPGVIH
TEDGELHGEL HEMGAMFPVM RRVGASFRAL GGDPEAIWNF ARSACRAGVT TSTDLLNELA
DETLADLFAT TAKDGYPLRL VPMLSAMALP PAAVAARAQE LRARSTDRLR LGGVKIVTDG
SIQGFTAQLN APGYHRGTDN GIWNIAPEAL NAMVDDLNRQ GIQMHIHVNG DGASLAAIEA
LEAALSGHFR PDHRHTLQHC QMADRAQLRR IAALQCCVNL FANHLYYFGD KHYEITIGPE
RACRMNPCAS ALEMGIPLAI HSDAPITPLA PLVTAWCAVN RLTDSGRQLG TSERISLDAA
LYAITLGAAY TLKLDGELGS VEVGKRADFA VLEDDPHALG PERLREARVW GTVFGGRPVP
AGSF
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