| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4285 |
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| Symbol | |
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| ID | 4582835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1459549 |
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| End bp | 1461141 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639771592 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_918045 |
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| Protein GI | 119386990 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.261799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.839381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCA TCCCCGCCTT TTCCCGCCGG TTCCTGCTGG CCGGCGCGGT CGCCCTGACC
GCGCTCGGCA CCGCCCCCTC GCTTTCCGCG CAAGAGGCGC AGACGGGCGG CACGCTGGTC
GTGGCCTCGG TGCAAAAGCC GCGCCACCTG AATGCCGCCG TGCAATCGGG CATCGCGACC
GGCGTGCCGG CGGCGCAGAT CTTCGCCACG CTGCTGCGCT ATGGCGAGGA TTTCGAGCCG
CAGCCCTACC TGGCCGAAAG CTGGGAATTC AGCGACGACA GCAAGGTGCT GACCCTGACG
CTGCGCAGCG GCGCGACCTT CCACGACGGC CAGCCGATCA CCGCCGAGGA CGTGGTCTGG
TCGCTGGGCG TGGTCAAGGA GAACCATCCC TTCTCCAGCA TGCTGGAGCC GGTCGAGGCT
TTCGAGGCGC CCGATCCGCA GACCGTGGTC ATCCGCATGA AGCAGCCGCA TCCGGCGATC
CTGCTGGTGC TGTCCTCGGC GCTGACGCCG ATCCTGCCGA AGCATGTCTT CGACGACGGG
CAGGACATCA AGTCGAACCC CAAGAACAAC CTGCCCGTGG GCTCGGGCCC GTTCAAGGTG
ACCGCGTTCG AGCCGGGCCA GCACATCATC CTGGAGCGGC ATGACGGCTT TTTCCTGGAG
GGGAGGCCCT ATCTGGACCG CATCGTGATC CGGCAATACC AGGACGCCAA TTCCGGCGTG
CTGGCGCTGG AATCGGGCGA AGCGCAGCTT TTCCCGCTGC TCGACTCGAC CCGGCTGATC
CGGCGGCTGG AGAAGTCCGG CGCCATGACC GTGACCGACC AGGGCTATGC CGGGATCGGG
CCGGTGAACT GGCTGGCCTT CAACACCAAG AGCCCGGCGC TGTCGGATGT GCGCGTGCGC
CAGGCCGTCG CCCACGCCAT CGACCGCGAC TTCGTCACCA AGGCGCTGCA TTCCGGCCTG
TCCAAGCCCG CGGTCGAGCC GGTTGTGCAG GGCAGCCCCT TCTATACCGA GGAGGTCGAG
CGCTACGATT TCGACCTGGA CAAGGCCAAG GCCCTGCTGG CCGAGGCGGG CTTCGGCGAG
GGGGGCGAGA CGCTGAAGCT GCGCATCGAC TACATCCCCG ACAACGAAGA ACAGCAGCGC
GCCATCGCCG AATATGTCAA GGCGGCGCTG GCCAAGGCGG GGGTCGAGGT CACCGTGCGC
GCCTCGCCCG ATTTCCCGAC CTGGGCGCAG CGCGTGGCCT CCTACGACTT CGACATGACC
ATGGACCAGG TCTTCAACTG GGGCGATCCG GTGATCGGGG TGAACCGGAC CTATCTGTGC
TCGAACATCC GCGAGGGGAT CATCTGGTCC AACACCCAGC AATATTGCAA CGAGGACGTG
GACAAGCTCT TGAACGAAGC CGGGGTCGAG CCCGACCTGG CCAGGCGCAA GGAGCTTTAC
GCGCAGGCGT TCAAGCAGAT CACCACCGAC ATCCCGATCC ATTTCATCAA CGAGGTGCCC
TATCACACGG TCTGGTCGCA GGCCGTGCAG AACCCGCCCG TCTCGATCTG GGGCGCGATG
GGGCCGATGG ATGAGGTCTG GCTGAAGCAG TAA
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| Protein sequence | MTPIPAFSRR FLLAGAVALT ALGTAPSLSA QEAQTGGTLV VASVQKPRHL NAAVQSGIAT
GVPAAQIFAT LLRYGEDFEP QPYLAESWEF SDDSKVLTLT LRSGATFHDG QPITAEDVVW
SLGVVKENHP FSSMLEPVEA FEAPDPQTVV IRMKQPHPAI LLVLSSALTP ILPKHVFDDG
QDIKSNPKNN LPVGSGPFKV TAFEPGQHII LERHDGFFLE GRPYLDRIVI RQYQDANSGV
LALESGEAQL FPLLDSTRLI RRLEKSGAMT VTDQGYAGIG PVNWLAFNTK SPALSDVRVR
QAVAHAIDRD FVTKALHSGL SKPAVEPVVQ GSPFYTEEVE RYDFDLDKAK ALLAEAGFGE
GGETLKLRID YIPDNEEQQR AIAEYVKAAL AKAGVEVTVR ASPDFPTWAQ RVASYDFDMT
MDQVFNWGDP VIGVNRTYLC SNIREGIIWS NTQQYCNEDV DKLLNEAGVE PDLARRKELY
AQAFKQITTD IPIHFINEVP YHTVWSQAVQ NPPVSIWGAM GPMDEVWLKQ
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