Gene Pden_4271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4271 
Symbol 
ID4582821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1442121 
End bp1443065 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content67% 
IMG OID639771578 
Productinner-membrane translocator 
Protein accessionYP_918031 
Protein GI119386976 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCTG CGCCATGCCT GCCTGATCCC CCGCCTCCCC GCGCGATCCC TGTCGCGCGG 
GGCCTTTTCG CCCGGTTTCA GGAGAAGCCC GTGATCTACC TTTTCCAGGT TCTGAACGGC
ATCGGTCTGG GGATGCTGTA TTTCCTGCTT GCGGTCGGCC TCAGCGTCAT CTTCGGCCTC
TTGCAGTTCG TGAACTTCGC CCATGGCGCC TTCTACCTGC TGGGCGCCTA TCTGACCTAT
GACCTGACCA TGCGCGGCTT CAGCTTCTGG GCCGCCATGC CGCTGGCCAC GCTGATCGTC
GCCGGCATCG CCGCGCTGAT CGAGGCGCTG CTGCTGCATC GCATCTACAA GCTGCCGCAT
ACCTTCCACA TCCTGGTGAC GGTCGGCCTG GCGCTGGTCG TGCAGGAACT GGTGATCATC
GCCTGGGGGC CGCTGGGCGG CTCGGTGCCC GCGCCCGAGG GGTTGCAGGG CGTCGTCATC
CTGGGCGATT TCATCTATCC GCAATATCGG CTGTTCACCA TCGGCTTCAC AGCCGTCCTG
GCCGGGCTGC TGTGGTGGCT TCTGGAGGGC ACGCGGCTGG GCGCCATCGT GCGCGGCGGG
TCCGAGTTGC CCTCGAACAT GGCACTGCTG GGCTACAACA CGCTGCGCAT CAACACCGCC
GTCTTCGGGT TCGGCGCCGG GCTTGCGGGG CTGGCCGGTG CGCTGGCCGC GCCGATCCGC
GGCGTCGAGC CCTTCATGGG GATCGAGGCG CTGTCGGTGG CCTTCGTCGT CGTCGTGATC
GGCGGCATGG GCAGCTATAC CGGCGCGCTG GTCGCGGGCC TGCTGGTCGG CGTGGTGCAA
AGCGTCATGA CCACGCTGTG GCCCGAGGGT GCGCGGCTGA TGATCTATGT CGGCATGGCG
CTGGTCATCG CGCTGATGCC CCGCGGCCTG TTGGGGAGGG CATGA
 
Protein sequence
MPAAPCLPDP PPPRAIPVAR GLFARFQEKP VIYLFQVLNG IGLGMLYFLL AVGLSVIFGL 
LQFVNFAHGA FYLLGAYLTY DLTMRGFSFW AAMPLATLIV AGIAALIEAL LLHRIYKLPH
TFHILVTVGL ALVVQELVII AWGPLGGSVP APEGLQGVVI LGDFIYPQYR LFTIGFTAVL
AGLLWWLLEG TRLGAIVRGG SELPSNMALL GYNTLRINTA VFGFGAGLAG LAGALAAPIR
GVEPFMGIEA LSVAFVVVVI GGMGSYTGAL VAGLLVGVVQ SVMTTLWPEG ARLMIYVGMA
LVIALMPRGL LGRA