Gene Pden_4268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4268 
Symbol 
ID4582818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1439677 
End bp1440381 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID639771575 
ProductABC transporter related 
Protein accessionYP_918028 
Protein GI119386973 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGG CTTTGCGACT GACCGATCTG CACAGCTATT ACGGCAAGAG CCACATCCTG 
CAAGGCGTCA CGCTGGAGGT CGGGCAGGGC GAGATCGTCA CCCTGCTGGG CCGCAACGGC
GCCGGAAAAA GCACGACGCT GAAGACCGCC GTGGGGCTGA TCACGCCCCG GCAGGGCCGC
GTCGAACTGG CCGGCCGCGA CATGACCGGC CAGCCGGCGC ATCGCATCGC CGCCGCCGGG
CTGTCGCTGG TGCCCGAGGA TCGCGGCATC TTCCAGCTGC TGACCGTCGA GGAGAACCTG
CGCATCGCCG AAAAGCGCGG CTCGCCATGG TCGCTTGGCG ACATCTACCG CATCTTCCCG
CGACTGGAAG AGCGCAGGAA GAACGGCGGC GGCCAGCTTT CGGGGGGCGA GCAGCAGATG
CTTTCCATCG CCCGGGCGCT GCTGAACGGT CCCAAGGTGC TGATGCTCGA CGAGCCGGTC
GAGGGCCTGG CCCCGATCAT CGTCGAGGAG ATCGTCGCCC AGATCCGCCT GATCCGCGAG
GCCGGCGTCC CGATCCTGCT GGTCGAGCAG AACCTGGCCG TCTGCAGCCA GCTTGCCGAC
CGGCATTACA TCCTGGAACT GGGCCGCATC ATGCATTGCG CCAGTGCCGA CGAGTTCCGC
AGCGACCCGG ACACCATCGA CCGCTACCTG GGCGTGAAGG CATGA
 
Protein sequence
MTPALRLTDL HSYYGKSHIL QGVTLEVGQG EIVTLLGRNG AGKSTTLKTA VGLITPRQGR 
VELAGRDMTG QPAHRIAAAG LSLVPEDRGI FQLLTVEENL RIAEKRGSPW SLGDIYRIFP
RLEERRKNGG GQLSGGEQQM LSIARALLNG PKVLMLDEPV EGLAPIIVEE IVAQIRLIRE
AGVPILLVEQ NLAVCSQLAD RHYILELGRI MHCASADEFR SDPDTIDRYL GVKA