Gene Pden_4259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4259 
Symbol 
ID4582809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1426808 
End bp1427551 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content71% 
IMG OID639771566 
Producthypothetical protein 
Protein accessionYP_918019 
Protein GI119386964 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID[TIGR02964] xanthine dehydrogenase accessory protein XdhC 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.626638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGG TCGAGATCAC CCGCACGCGC GGCTCCTCCC CGCGCGAAAA GGGGGCGGCG 
ATGTTCGTCG CCCCCGAGGG GCTCAGCGGC ACCATCGGCG GCGGCCAGCT GGAATACATG
GCCATCGACC GCGCCCGGCA GATGCTGGCG CGCGGCGAGG CGCAGGCCAT GATGGACGTG
CCGCTGGGCC CCGAGATCGG CCAATGCTGC GGGGGCCGGG TCGAGCTTAC CCTGACCCGC
GTGGCCGAGG CCCCCGCCGG CCCCGAGCAT CCGCAGGTGC TGATCTTCGG CGCCGGCCAT
GTCGGCCGGG CGCTTGCCAA GGCGCTGGCA TTGCTGCCCT TGCGCCCGGT CCTGATCGAC
CAGCGCGCCG GCGAACTGGC GCAAGCGACC GGCGAGACCC GCCTGACGCC GCTGCCCGAG
GCCGAGATCC GGCAAGCGCC CTTCGGCACC AGCCATATCA TCGTCACCCA TGACCATGCG
CTGGACTTCC TGCTTGCCGC CGAGGCTCTG CGCCGCATGG ACGCGCCCTA TATCGGCATG
ATCGGCAGCA AGACGAAGCT GGTGCAGTTC CGCCGCTTCG CCCGCGCCCA GGGGCTCGAC
ACCGACCGGC TGACCTGCCC CATCGGCGCC GGCTGGTCGC GCGACAAGCG CCCCGAGGTC
ATCGCCGCCT TCACCGCCGC CGAGATCATC GGCCGGCTGA CCGAAACCGT TTCACCGTTC
GAAAAATACT CATGCGACAG CTGA
 
Protein sequence
MIRVEITRTR GSSPREKGAA MFVAPEGLSG TIGGGQLEYM AIDRARQMLA RGEAQAMMDV 
PLGPEIGQCC GGRVELTLTR VAEAPAGPEH PQVLIFGAGH VGRALAKALA LLPLRPVLID
QRAGELAQAT GETRLTPLPE AEIRQAPFGT SHIIVTHDHA LDFLLAAEAL RRMDAPYIGM
IGSKTKLVQF RRFARAQGLD TDRLTCPIGA GWSRDKRPEV IAAFTAAEII GRLTETVSPF
EKYSCDS