Gene Pden_4257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4257 
Symbol 
ID4582807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1423057 
End bp1424502 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content68% 
IMG OID639771564 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_918017 
Protein GI119386962 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A 
TIGRFAM ID[TIGR02963] xanthine dehydrogenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCACG AATTGCGCTT TCTTCTGAAC GACACCGAGA TCAGCCTGAC CGAGGCGGGC 
TCGCGCGACA CACTTCTGGA CTTCCTGCGG CTCAATCGCC GCCTGACCGG CACCAAGGAG
GGCTGCGCCG AGGGCGATTG CGGCGCCTGC ACCGTGCTGG TCGGCCGGTT GCACCAGGGC
CGGCTGCATT ACGAGCCGAT CAACGCCTGC ATCCGCTTCC TGGCCTCGTG CCACGGCTGC
CATGTCGTCA CCGTCGAGCA TCTGCGCGGC GCTGATGGCG GGCTGCACCC GGTCCAGGCC
GCCATGGTCG AGCATCACGG CAGCCAGTGC GGCTTTTGCA CGCCGGGCTT CGTCATGGCG
CTTTACGGGC TGTGGATGTC CGATCCGCAT CCCGACATGC TGGCGATCGA GACCGCGCTG
CAAGGCAACC TGTGCCGCTG CACCGGCTAC GAGCCGATCG TGAAGGCGGC CTTCGCGGCC
AGCGAGGCGG GCGGGCAACA CATGGATGCG CTGACGGTCG AGCGCGACCG CATCACCGCC
GCGCTCGATG CCATTCCGCG CGAACGCGTC GAGGTGGCGC GCGGCGAGGA TCGTGCCATC
CTGCCGGCCG ATGCCGCCGA CCTGGCGCAG GTCCTGGCCG AGAACCCCAA GGCCACCATC
GTCGCGGGCG CGACCGACGT GGGCCTGTGG GTGACGAAAT TCCTGCGCAA CATCTCTCCG
GCCGTGTTCA TCGGCCATCT GCAGGATCTC AAGAGGATCG AGATCGCCCC CGGCCACATC
ACCATCGGCG CCGGCGTGAC CTATTCCGAG TTCGAGCCCT TCCTGCGCGA GCATTTCCCC
GAGGCGGTGG ATTACTGGCT GCGCATCGGC GGCTGGCAGG TCAGGAACGC CGGCACCATC
GGCGGCAACG TGGCGAACGG CTCGCCCATC GGCGAGACCC CGCCGCTGCT GATCGCGCTT
GGCGCGAGCC TGCGGCTGCG CAGCGCCGAG GGCGCACGCG AACTGCCCAT CGAGGACTAC
TTCATCGAAT ACGGCAAGCA GGACCGCCGC CCCGGCGAGT TCGTGGAATC GATCACCGTG
CCGCTGAAAG GCGAGGCCAG GATCGCCGCC TACAAGGTCT CCAAGCGCCA TCACGCCGAT
ATCACCGCCT CGGCCGCCGC CTTCCGGGTG GAAACCGACG GCGCCACGAT CATCGACGCG
CGCGTGGCAT TCGGCGGCAT GGCCGCGACA CCGAAACGCG CCACCCAGGC CGAGGCGGCG
CTGAAGGGCC AGCCCTTCAC CGCCGAGACC TTCGAGGCCG CCGCGCGTGC GGTCGCAAAC
GACTTCCAGC CGCTCAGCGA CTGGCGGGCC AGCAAGGAAT ATCGCCAGCA ACTCGCCGCC
AACTTCTTCC GCCGCTTCTG GCTTGAACAG CAGGGCGCAG ACCACCGCCT GAGGAGGGTC
GAATGA
 
Protein sequence
MGHELRFLLN DTEISLTEAG SRDTLLDFLR LNRRLTGTKE GCAEGDCGAC TVLVGRLHQG 
RLHYEPINAC IRFLASCHGC HVVTVEHLRG ADGGLHPVQA AMVEHHGSQC GFCTPGFVMA
LYGLWMSDPH PDMLAIETAL QGNLCRCTGY EPIVKAAFAA SEAGGQHMDA LTVERDRITA
ALDAIPRERV EVARGEDRAI LPADAADLAQ VLAENPKATI VAGATDVGLW VTKFLRNISP
AVFIGHLQDL KRIEIAPGHI TIGAGVTYSE FEPFLREHFP EAVDYWLRIG GWQVRNAGTI
GGNVANGSPI GETPPLLIAL GASLRLRSAE GARELPIEDY FIEYGKQDRR PGEFVESITV
PLKGEARIAA YKVSKRHHAD ITASAAAFRV ETDGATIIDA RVAFGGMAAT PKRATQAEAA
LKGQPFTAET FEAAARAVAN DFQPLSDWRA SKEYRQQLAA NFFRRFWLEQ QGADHRLRRV
E