Gene Pden_4253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4253 
Symbol 
ID4582803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1419350 
End bp1419775 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content73% 
IMG OID639771560 
Producthypothetical protein 
Protein accessionYP_918013 
Protein GI119386958 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.874901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.361852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCA TCACCCGACT GGACCAGGCG GATGCGCGCC TGCTGATCGC CGGCGCCGAG 
GCCCATGCCC GCGAGATCGG CGTGCCCATG TGCATCGCCG TCACCGACGA AAGCGGCCAG
CTTCTGGCCT TTTCGCGCAT GGATGGCGGC AAGGTGACAT CGGCCACCAT CGCCGTCGAC
AAGGCGTTCA CCGCCGCGGC CGCGCGCAAG GCCACGCATG AATACGGCGC CGCCAGCCAG
CCGGGCGCGC CGGCCTGGGG CATCTCCTCG GCCATCGGCG GGCGGCTGAT GGTGGTGGGC
GGCGGGTTGC CGGTCGATCA CGACGGCCAG ACCGTCGGCG GCATCGGCGT CTCGTCCGGC
ACGCCGGCCC AGGACCAGGC GGTGGCGCAG GCCGGCATCG ACCATTGGCG GGCGCATCGC
GCCTGA
 
Protein sequence
MLTITRLDQA DARLLIAGAE AHAREIGVPM CIAVTDESGQ LLAFSRMDGG KVTSATIAVD 
KAFTAAAARK ATHEYGAASQ PGAPAWGISS AIGGRLMVVG GGLPVDHDGQ TVGGIGVSSG
TPAQDQAVAQ AGIDHWRAHR A