Gene Pden_4252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4252 
Symbol 
ID4582802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1418104 
End bp1419321 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content74% 
IMG OID639771559 
Productmajor facilitator transporter 
Protein accessionYP_918012 
Protein GI119386957 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.227689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGCGA ACAGGCAGCC GCTGATGCTG GCCGTGGTGG CCATGGTCGG GCTGGCGCTG 
CGGCCGTTCC TGACCGGGGT CGGCCCCGTC GCGACGCCGA TCTCGGCCGA AACCGGCCTT
TCCATGCAGG GCCTGTCGGC CCTGACGCTG CTGCCGATCC TGCTGATGGG GGCCGGGGCC
TTTCTCGGGC CGGCGATCCA GGCGCGGCTG GGCGCGAAAC GCGCCGCCGT GCTGGCGCTG
CTGGTGCTGA GCCTGGGCTC GGGCCTGCGG CTCGGGGCGC ATTCGGCGCT GGACATGCTG
GGCTCGGCCG TGCTGCTAGG CGTGGGCGCG GCGGTGGTGC AGGCGGTGTT TCCCACCATC
ATCAAGCGCG AGTTCCCGCG CGGCATCAAC CTGGCCATGG GGCTTTACGC CGCGATGATG
ATGGGCGGCG GCGCCTTCGG CGCGCAGGCC GCGCCGCTGA TCGCCGCCTG GTCGGGAAGC
TGGCGGCTGG CGCTTGGCTG GCTGGCCCTG CCCGCCGCAC TGACCGCGCT GCTGGTCGCG
CTGGCCCTGC CGCGCGAGCC GCGCAAGCCG CAGGGCAGCG GGCAAGGACT GTGGCGCTGG
CTGCGCCTGC CGCGGGTCTG GCTGCTGATG GCCTGCTTCG GGTTGATCAA CGGCGGCTAT
TCCTCGTCCG TCGCCTGGCT TGCGCCCGCA TTCCAGGACC TGGGCTGGTC GGCGGGCGCC
AGCGGCGGGC TGCTGGCGGT GCTGGCGGTG GGACAAGCCG TCTCGGCGCT GGTCACGCCG
GTCCTGGCCA GCCGCGGCAG CGACCGGCGG CCGTGGCTGG GGATCTGCCT TGCGATGCAG
GCGCTGGGCT TCGCCATGCT GGTCCTGCGC CCCGAGGCCG CACCCTATCC CATCGCCTTC
CTGCTGGGCG CCGGGCTTGG CGGCTGCTTT TCGCTGATGA TGATCGTGGC GCTGGACCAC
CTGCCCGATC CGGCGCAGGC CGGGGCGCTG GCGGCGCTGA TGCAGGGCGG AGGCTTCCTG
CTGGCCGCGA TCCCGCCCTG GCTTCTGGCG CTGCTGCACG ACCTGACCGG CAGCTTCACC
CCCGGCTGGA CGATGCATCT TGCCGCCGTG CTGGCGGTCT GCGTCCTGGC GCTGCGCCTG
TCGCCGGCCA GCTATCGCGG TGCCCTGCGC CAACCCGACC CGCAAGGCGC CGGCCCGGGC
GCAGCACCGG CCGAGTGA
 
Protein sequence
MKANRQPLML AVVAMVGLAL RPFLTGVGPV ATPISAETGL SMQGLSALTL LPILLMGAGA 
FLGPAIQARL GAKRAAVLAL LVLSLGSGLR LGAHSALDML GSAVLLGVGA AVVQAVFPTI
IKREFPRGIN LAMGLYAAMM MGGGAFGAQA APLIAAWSGS WRLALGWLAL PAALTALLVA
LALPREPRKP QGSGQGLWRW LRLPRVWLLM ACFGLINGGY SSSVAWLAPA FQDLGWSAGA
SGGLLAVLAV GQAVSALVTP VLASRGSDRR PWLGICLAMQ ALGFAMLVLR PEAAPYPIAF
LLGAGLGGCF SLMMIVALDH LPDPAQAGAL AALMQGGGFL LAAIPPWLLA LLHDLTGSFT
PGWTMHLAAV LAVCVLALRL SPASYRGALR QPDPQGAGPG AAPAE