| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4246 |
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| Symbol | |
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| ID | 4582796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1411347 |
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| End bp | 1413095 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639771553 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_918006 |
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| Protein GI | 119386951 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.704595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGAC CCTTCACCCC CGCGCCCTGG CCGCGCAAGC TGCGCTCGCA GCATTGGTAT
GGCGGCAATT CGCGGGACAC GATCTATCAT CGAGGATGGT TGAAGAATCA GGGCTATCCC
CATGATCTGT TTGACGGAAG GCCGGTGATC GGCATCCTGA ACACCTGGTC GGACCTGACG
CCCTGCAACG GCCATCTGCG CGAACTGGCC GAGAAGGTGA AGGCGGGCGT CTGGGAGGCC
GGAGGCTTTC CGCTGGAGGT GCCGGTGTTT TCGGCCAGCG AGAACAGCTA TCGCCCGACC
GCGATGATGT ATCGCAACCT TGCCGCCATG GCGGTCGAGG AGGCGATGCG CGGCCAGCCC
ATCGACGGCG CCGTGCTGCT GGTCGGCTGC GACAAGACCA CGCCCAGCCT GCTGATGGGG
GCGGCCTCGA CCGACATCCC CTCGATCGTC GTTACCGGCG GGCCGATGCT GAACGGCTGG
TTCCGGGGCG AGCGCATCGG CTCGGGCACG CATCTGTGGA AATTCTCTGA AGCCGTGAAG
GCGGGAGAGA TGACGCAGGC CGAGTTCCTC GAGGCCGAGG CGAGCATGTC GCGGTCCTCG
GGCACCTGCA ACACCATGGG CACCGCCTCG ACCATGGCCA GCATGGCCGA GGCGCTGGGG
ATGGCGCTGT CGGGCAATGC CGCGATCCCG GCGGTCGACT CGCGCCGCCG CGTCATGGCG
CAGTTGACCG GCCGGCGCAT CGTGCAGATG GTCAAGGACG ACCTGAAGCC CAGCGACATC
CTGACCCGCG CCGCCTTCGA GAATGCGATC CGCACCAACG GCGCCATCGG CGGCTCGACC
AATGCGGTGA TCCACCTGCT GGCCCTGGCG GGCCGGGTCG GGATCGACCT GACGCTGGAC
GACTGGGACC GGTTGGGCCG CGACGTGCCG ACCATCGTGA ACCTGATGCC CTCGGGCCGG
TACCTGATGG AAGAATTCTT CTATGCCGGT GGATTGCCGG CGGTTCTTCA GAGATTGGGA
GAAGCCGGGC TGCTCGATCG CGAGGCGCTG ACCGTCTCGG GCCGCACGAT CTGGGAAGAG
GTGCGCGAGG CCCGGAACTG GAACGAGGAC GTCATCCTGC CCGCCGACCG GCCGCTGACC
GAACAGGGCG GCATCGCGGT GCTGCGCGGC AACCTGGCGC CGGGCGGGGC GGTGCTGAAG
CCCTCGGCCG CCAGCCCGCA TCTGCTGGTG CATCGCGGCC GCGCGGTGGT CTTCGAGGAT
ATCGACGATT ACAAGGCCCG CATCGAGGAC GAGGCGCTGG ACATCGACGA GACCTGCATC
ATGGTGCTGA AGATGTGCGG CCCGCGCGGC TATCCGGGCA TGGCCGAGGT CGGCAACATG
GGCCTGCCGC CCAAGGTGCT GAGGAAGGGC ATCACCGACA TGGTGCGCAT CTCGGACGCG
CGCATGTCGG GCACCGCCTA TGGCACCGTG GTGCTGCATG CCTCGCCCGA GGCGGCGCGG
GGCGGGCCGC TGGCCGTGGT GCGCGACGGC GACATGATCG AGCTGGACGT GCCGAACCGG
CGGCTGCACC TGGACGTGCC GGAGACCGAG ATCGCCCGCC GCCTCGCCGA TTGGCGGAAC
CCGGCGCCAA GGCCGCCCGG CGGCTATGCG CAACTGTTCC ACGACCATGT CGAGGGGGCC
GAGACCGGGG CGGATTTCGA CTTCCTGCGC GGCTGCCGCG GCCGCGAGGT CGGAAAGGAC
AGCCACTGA
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| Protein sequence | MTRPFTPAPW PRKLRSQHWY GGNSRDTIYH RGWLKNQGYP HDLFDGRPVI GILNTWSDLT
PCNGHLRELA EKVKAGVWEA GGFPLEVPVF SASENSYRPT AMMYRNLAAM AVEEAMRGQP
IDGAVLLVGC DKTTPSLLMG AASTDIPSIV VTGGPMLNGW FRGERIGSGT HLWKFSEAVK
AGEMTQAEFL EAEASMSRSS GTCNTMGTAS TMASMAEALG MALSGNAAIP AVDSRRRVMA
QLTGRRIVQM VKDDLKPSDI LTRAAFENAI RTNGAIGGST NAVIHLLALA GRVGIDLTLD
DWDRLGRDVP TIVNLMPSGR YLMEEFFYAG GLPAVLQRLG EAGLLDREAL TVSGRTIWEE
VREARNWNED VILPADRPLT EQGGIAVLRG NLAPGGAVLK PSAASPHLLV HRGRAVVFED
IDDYKARIED EALDIDETCI MVLKMCGPRG YPGMAEVGNM GLPPKVLRKG ITDMVRISDA
RMSGTAYGTV VLHASPEAAR GGPLAVVRDG DMIELDVPNR RLHLDVPETE IARRLADWRN
PAPRPPGGYA QLFHDHVEGA ETGADFDFLR GCRGREVGKD SH
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