Gene Pden_4234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4234 
Symbol 
ID4582784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1395072 
End bp1395761 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content69% 
IMG OID639771541 
Productnitrate reductase molybdenum cofactor assembly chaperone 
Protein accessionYP_917994 
Protein GI119386939 
COG category[C] Energy production and conversion 
COG ID[COG2180] Nitrate reductase delta subunit 
TIGRFAM ID[TIGR00684] nitrate reductase molybdenum cofactor assembly chaperone 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0808187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.335681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCT TCCGAGCCCT TTCCGCGCTG CTCAGCTATC CCAGCGAGGA TCTGATCGCC 
GCACTGCCCG AAATCGACGC AATCCTGCAG GCCGAGGGGC TGTTCGGCCC CAAGCGCATG
GAGGAAATCC GCCGCCTGCT GCATGAACTG CGGCAGGGCG ACCTCTACGA TCTTCAGGAG
CGCTATGTGC TGCTGTTCGA CCGCTCGCGC AGCCTGTCGC TGAACCTGTT CGAGCATGTG
CATGGCGAAA GCCGCGACCG CGGCGGCGCC ATGGTGGACC TGCTGGAGAC CTATCGCGCC
GGCGGCTTCG ACCTGGTCGG GTCGGAACTG CCCGACCACC TGCCGGTGCT GCTGGAATAC
CTCTCGACCC GGCCCCTGCC CGAGGCAGAG GCGCTCCTGG CCGATGCGTC CCATATCCTC
GTCGCGCTGG CCGAACGGCT GACGCGGCGC GAGACGGCCT ATGCCGGCGT GCTCAGCGCG
TTGGTGACGC TGGTCGTGAC CGAGCCGGCC GCGCTGCCCG AGGAACTGGC CGCCGTCCCC
GACGACGACC CCGAGGACCT GGCGGCGCTG GATGCCGTCT GGGAAGAGGC GCAGGTCACC
TTCGGCCCCG ATCCCAATGC CGGCTGCCCG GTCAGCCGCG ACATCCTTGC CCGCATGGAC
GCCCCGCGCG TCGCCAACCC GGCGCAATGA
 
Protein sequence
MKSFRALSAL LSYPSEDLIA ALPEIDAILQ AEGLFGPKRM EEIRRLLHEL RQGDLYDLQE 
RYVLLFDRSR SLSLNLFEHV HGESRDRGGA MVDLLETYRA GGFDLVGSEL PDHLPVLLEY
LSTRPLPEAE ALLADASHIL VALAERLTRR ETAYAGVLSA LVTLVVTEPA ALPEELAAVP
DDDPEDLAAL DAVWEEAQVT FGPDPNAGCP VSRDILARMD APRVANPAQ