Gene Pden_4233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4233 
Symbol 
ID4582783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1394356 
End bp1395057 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content64% 
IMG OID639771540 
Productrespiratory nitrate reductase, gamma subunit 
Protein accessionYP_917993 
Protein GI119386938 
COG category[C] Energy production and conversion 
COG ID[COG2181] Nitrate reductase gamma subunit 
TIGRFAM ID[TIGR00351] respiratory nitrate reductase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0298613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.327714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATT TCCTTTTCGG CATCTACCCC TATATCGCCA TCACGGTGAT GATCCTCGGT 
TCGGTCATCC GCTACGACCA GGACCCGTTC AGCTGGAAAT CGAAGTCCAG CCAGATCCTG
CGGCGGCGGC AATTCGTCAT CGGCTCGGTC CTGTTCCATG TCGGCGTGCT GGTGATCCTT
GGCGGCCATC TGGTCGGGTT GCTGACGCCG GTCGCCGTAT TCGACGGCTT GGGCATCAGC
CATGGCGCCA AGCAGGTGCT GGCGATGACC GCGGGCGGCA TCGCCGGGGT CATGGCGCTG
GTGGGCGGCG GGATGCTGCT GCATCGTCGG CTTTACGACC CGCGGGTGCG CGCCCATACC
ACCCTGGCCG ATACCGGCAT CCTGGCCTTG CTGATCGCGC AGCTGGTGCT GGGGCTGATG
ACCATCCTGG TCTCGATGCA GCATCTGGAC GGGCACGAGA TGGTGCTGCT GATGTCCTGG
GCGCAAGGGA TCGTCTATTT CCGCGCCGGC GCGGCCGAGC ATCTGGCCCA TGTGCATTGG
CTCTTCAAGC TGCATATCCT GCTGGGGCTG ACCATCTTCC TGCTGTTCCC GTTCACGCGG
CTTGTCCACA TGATCTCGGC CCCCGTGCGC TATCTGTGGC GGCCGGGCTA CCAGATCGTG
CGGACCAAGC GTCAACCGGC CAAGCGCTAT CCGGCGGAGT AA
 
Protein sequence
MNNFLFGIYP YIAITVMILG SVIRYDQDPF SWKSKSSQIL RRRQFVIGSV LFHVGVLVIL 
GGHLVGLLTP VAVFDGLGIS HGAKQVLAMT AGGIAGVMAL VGGGMLLHRR LYDPRVRAHT
TLADTGILAL LIAQLVLGLM TILVSMQHLD GHEMVLLMSW AQGIVYFRAG AAEHLAHVHW
LFKLHILLGL TIFLLFPFTR LVHMISAPVR YLWRPGYQIV RTKRQPAKRY PAE